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PROTEIN: HRGMv2_1542_34_10

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Protein File & Metadata
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Source:
HRGMv2_1542_34_10.pdb
Genome ID:
HRGMv2_1542
Protein ID:
HRGMv2_1542_34_10

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRAFDFEMSR   RGFASALAAG   ALSLALAGCG   GGAAGAGSAA   DSAATDGAGA   AAEPVAVHVA 60
SLKGPTSIGL   VQFMDQAADG   ETDNEFDFAI   NTAADEIVPK   VIQGDIDIAL   VPANVASVLY 120
NKTEGAVQVI   DINTLGVLNV   VTGNADVTSF   GDLAGRTAYM   TGKGTTPEYV   MNYLLERAGL 180
TGQVTLEFKS   EPTEVLSELL   ADPSAVGVLP   EPFKTAAIAK   SEGKLSAPVS   LTDVWDELAS 240
DTGSRLLTGV   TVVRRAFAEE   HPEAVAEFLR   CHAASVKAVN   AAPADWAQAV   VDAGIVDNAK 300
IAEKAIPGCM   LVCQTGKDMK   AALSGYLQVL   SDADASAVGG   KLPADDFYYL   E 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F6W2-F1-model_v4 53 350 28 325 0.7468 0.8604
AF-A0A0H3GP99-F1-model_v4 45 351 17 318 0.7093 0.8113
AF-A0A0H3GZA9-F1-model_v4 52 351 25 310 0.7089 0.8431
AF-Q9I0P2-F1-model_v4 50 351 19 306 0.7086 0.8356
AF-A0A0D2GYL1-F1-model_v4 54 351 1 295 0.7024 0.8033
AF-U7PRE8-F1-model_v4 51 351 14 321 0.6878 0.7926
AF-A0A0H3GR32-F1-model_v4 51 351 46 344 0.6871 0.813
AF-U7Q5Y8-F1-model_v4 49 351 2 313 0.6853 0.7871
AF-U7PXF6-F1-model_v4 54 351 1 294 0.6819 0.8056
AF-Q9I0N8-F1-model_v4 52 351 24 310 0.6798 0.8006
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-L0RFS4-F1-model_v4 GH23 35 304 4 451 0.4308 0.6309
AF-A0A1C7H7G1-F1-model_v4 GH23 52 301 37 442 0.4308 0.6673
AF-A0A1Y4PH24-F1-model_v4 GH23 52 301 37 442 0.4289 0.6632
A0A975KCS4 GH23 49 302 43 339 0.4269 0.6596
AF-E1WT20-F1-model_v4 GH23 52 301 37 443 0.4265 0.6616
AF-A0A0K6BW89-F1-model_v4 GH23 52 301 37 442 0.4255 0.6596
AF-A0A0P0GMK8-F1-model_v4 GH23 52 301 38 442 0.4244 0.6568
AF-A0A0K2J3V1-F1-model_v4 GH23 49 302 59 365 0.4201 0.6612
AF-B2RKI6-F1-model_v4 GH23 29 301 66 502 0.4178 0.6282
A0A1Y3Y3U2 GH23 52 299 37 282 0.4071 0.6375
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A975KCS4 GH23 49 302 43 339 0.4269 0.6596
C6BRT1 GH23 42 304 34 474 0.4216 0.6403
E1YCM4 GH23 27 304 15 450 0.4186 0.594
A8ZWR8 GH23 25 304 12 450 0.4135 0.5773
A0A6I6K4Y9 GH23 52 299 48 299 0.408 0.6396
A0A1Y3Y3U2 GH23 52 299 37 282 0.4071 0.6375
F3Z2E8 GH23 55 304 43 459 0.4061 0.6382
A0A0S2HZI4 GH23 24 299 34 305 0.399 0.5854
Q0VPC5 GH23 5 297 48 517 0.3608 0.5609
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3hn0-assembly1.cif.gz_A 54 351 1 279 0.7872 0.8933
2x26-assembly2.cif.gz_B 53 350 1 286 0.733 0.8347
2x26-assembly1.cif.gz_A 53 351 1 287 0.7143 0.8331
3un6-assembly1.cif.gz_A 54 351 1 283 0.6829 0.7875
3uif-assembly1.cif.gz_A 53 351 3 307 0.6757 0.7858
3ksx-assembly1.cif.gz_A 52 351 1 289 0.6648 0.753
7ahr-assembly1.cif.gz_A 54 351 5 280 0.6604 0.7713
7an6-assembly1.cif.gz_B 54 351 5 282 0.6539 0.7585
6st1-assembly2.cif.gz_B 56 351 1 295 0.6532 0.7368
7an9-assembly1.cif.gz_B 55 351 1 277 0.6523 0.7526
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0SP84-F1-model_v4 52 351 28 325 0.6906 0.8078
AF-A9WGD2-F1-model_v4 52 351 42 344 0.676 0.8031
AF-Q9KXN1-F1-model_v4 53 350 1 282 0.6716 0.7683
AF-P75853-F1-model_v4 45 351 16 311 0.6632 0.7677
AF-Q8FUN4-F1-model_v4 50 351 19 317 0.6426 0.7382
AF-Q576E1-F1-model_v4 50 351 19 317 0.6374 0.7326
AF-Q5ZV75-F1-model_v4 53 351 5 297 0.6365 0.7429
AF-Q47537-F1-model_v4 53 351 20 317 0.6354 0.734
AF-Q2YJB6-F1-model_v4 50 351 19 317 0.6351 0.7303
AF-Q8YDR6-F1-model_v4 50 351 19 317 0.6344 0.7295
Download Full SwissProt Results