PROTEIN: HRGMv2_1540_33_6
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Protein File & Metadata
Source:
HRGMv2_1540_33_6.pdb
Genome ID:
Protein ID:
HRGMv2_1540_33_6
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Protein Sequence
MHVFNSRADF DAQMKSVKKW MRTGQALDGV ADLQHDVAYS IGDSLVYWWV YAREAATADL 60 VGHRRYHAVL APLDGDLTVE VAPKADLTCT RAYSDIDDRE RFEGTGETVT IPAGGVAVAE 120 IDEAYRVVAD AADPRVVVLH VTVEGYSFPN K 151
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.8992 |
0.9615 |
| AF-Q8CYF8-F1-model_v4 | 1 | 144 | 1 | 150 | 0.8104 |
0.8767 |
| AF-P45424-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8075 |
0.8691 |
| AF-Q32BB8-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8055 |
0.8674 |
| AF-Q8ZLQ9-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8026 |
0.867 |
| AF-O25673-F1-model_v4 | 1 | 150 | 2 | 178 | 0.7965 |
0.8922 |
| AF-Q8ZL82-F1-model_v4 | 1 | 146 | 1 | 154 | 0.792 |
0.8593 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7884 |
0.8532 |
| AF-Q8DNV1-F1-model_v4 | 1 | 144 | 1 | 150 | 0.7826 |
0.8507 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7768 |
0.8475 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4tsd-assembly1.cif.gz_A | 1 | 150 | 1 | 177 | 0.7878 |
0.8856 |
| 1s4c-assembly1.cif.gz_A | 1 | 146 | 1 | 150 | 0.7801 |
0.8401 |
| 1s4c-assembly1.cif.gz_D | 1 | 146 | 1 | 140 | 0.7755 |
0.8402 |
| 1s4c-assembly2.cif.gz_B | 1 | 146 | 1 | 155 | 0.774 |
0.8459 |
| 1s4c-assembly2.cif.gz_C | 1 | 146 | 1 | 147 | 0.7722 |
0.8237 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC74-F1-model_v4 | 1 | 145 | 1 | 143 | 0.8997 |
0.9618 |
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.8992 |
0.9615 |
| AF-P45424-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8075 |
0.8691 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7884 |
0.8532 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7768 |
0.8475 |