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PROTEIN: HRGMv2_1539_11_5

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_1539_11_5.pdb
Genome ID:
HRGMv2_1539
Protein ID:
HRGMv2_1539_11_5

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Detailed structural information will appear here after analysis...

Protein Sequence 
MPTIGLRVVR   QSGDVVCEIE   REDEVTLSWR   GGYQPGDKLV   VRCERVPAHL   VVKLDTSLAE 60
SHVLMTQKTF   EFSIPLDERQ   KAYGKGWAFE   DERHYAYVRV   EDAREAGAWR   CLSRNSCDHE 120
DADGVYPHAT   SNIPMDNPRF   IARNAIDGVI   ETSSHGSWPH   ESWGVAGRPD   AWLKIDFGEL 180
VVADELRLYL   RADFPHDTCW   QTAQLELSDG   SVTDLSLEKT   GARQVFDLGR   HRITWARLQN 240
LVKRDEDGFP   GLSQMEIWGR   RII 263
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q3TV70-F1-model_v4 108 263 1 140 0.635 0.846
AF-Q86WQ0-F1-model_v4 108 262 1 139 0.6298 0.8414
AF-Q1ED21-F1-model_v4 108 263 1 141 0.628 0.8351
AF-A0A183XDX1-F1-model_v4 28 263 7 180 0.519 0.7067
AF-H2L2B8-F1-model_v4 59 263 20 178 0.5055 0.7439
AF-Q09913-F1-model_v4 4 263 92 341 0.494 0.5992
AF-Q5AD02-F1-model_v4 3 262 88 342 0.4907 0.5855
AF-U7PMW0-F1-model_v4 4 263 100 358 0.4876 0.5835
AF-P25335-F1-model_v4 3 260 92 343 0.4857 0.5862
AF-A0A0R4IY57-F1-model_v4 103 260 132 306 0.4387 0.7743
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
B1C4D3 GH105 1 263 35 370 0.5737 0.9268
A0A2G4YLU0 CBM47 107 263 23 167 0.5522 0.8463
A0A9E9K109 CBM32 8 263 1 559 0.4377 0.619
AF-A0A410GHY9-F1-model_v4 CBM47 107 263 161 315 0.4289 0.7791
AF-A0A1M4E470-F1-model_v4 GH43_29 11 259 16 462 0.4197 0.5696
AF-A0A858MSU4-F1-model_v4 CBM32 108 263 178 324 0.414 0.7989
AF-A0A061B3V4-F1-model_v4 AA14 3 260 144 456 0.3966 0.6272
AF-A0A7H8JXZ3-F1-model_v4 GH20 1 261 37 658 0.3939 0.572
AF-E0S0U5-F1-model_v4 GH43_33 26 262 235 488 0.3867 0.5586
AF-W9JP00-F1-model_v4 GH142 57 263 55 665 0.3783 0.6772
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K4GBJ7 CBM47 107 263 22 168 0.5773 0.8149
B1C4D3 GH105 1 263 35 370 0.5737 0.9268
B5DCK4 CBM47 103 263 14 170 0.5537 0.7891
A0A2G4YLU0 CBM47 107 263 23 167 0.5522 0.8463
A0A1H4DH25 CBM47 107 260 44 193 0.5235 0.778
A0A1D8AZA7 CBM47 107 263 65 222 0.5048 0.7722
B3VLC2 CBM47 104 263 125 269 0.4525 0.8267
UVH36227.1 CBM47 3 263 195 488 0.4481 0.6163
A0A6B9ZCG4 CBM32 1 262 257 467 0.4442 0.7022
Q1D2P6 CBM32 12 260 109 407 0.4425 0.5752
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2j1u-assembly1.cif.gz_A 60 260 1 141 0.6249 0.8295
4ki5-assembly1.cif.gz_M 108 261 1 154 0.5879 0.758
1o59-assembly1.cif.gz_A 4 260 84 318 0.487 0.6061
3cqo-assembly1.cif.gz_C 107 263 1 291 0.449 0.7822
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q3TV70-F1-model_v4 108 263 1 140 0.635 0.846
AF-Q58DU8-F1-model_v4 108 263 1 140 0.6328 0.8432
AF-Q86WQ0-F1-model_v4 108 262 1 139 0.6298 0.8414
AF-Q1ED21-F1-model_v4 108 263 1 141 0.628 0.8351
AF-H2L2B8-F1-model_v4 59 263 20 178 0.5055 0.7439
AF-Q3KFK9-F1-model_v4 4 263 81 331 0.5046 0.6013
AF-Q87YX4-F1-model_v4 4 263 81 331 0.5044 0.6017
AF-Q6LPX9-F1-model_v4 4 263 79 330 0.5044 0.5983
AF-Q5YP02-F1-model_v4 4 263 88 329 0.4982 0.6126
AF-Q09913-F1-model_v4 4 263 92 341 0.494 0.5992
Download Full SwissProt Results