PROTEIN: HRGMv2_1538_23_18
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_1538_23_18.pdb
Genome ID:
Protein ID:
HRGMv2_1538_23_18
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MPVIGLSVVR QSGEIACEME RENEVTLSWR GDYQPGDKLV VRCDTVPVHL VMKLDVSLAE 60 SCVLLTQDTF EFPIPLDERQ KAYGKGWAFE DERHYACVRV EDPRETGAWG CLSRNSCDYE 120 GAAGLFPHAA SNIPMDNPQF IARNAIDGVI ETSSHGSWPH ESWGVAGRSD AWLKIDFGEP 180 VITDELRLYL RADFPHDTCW ESAKLELSDG STLDLALEKS GECQVFDLGG QCISWVKLKQ 240 LVKRTEDGFP ALSQIEIWGR RLVQNT 266
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3TV70-F1-model_v4 | 108 | 263 | 1 | 140 | 0.6275 |
0.8391 |
| AF-K0F8Z8-F1-model_v4 | 4 | 263 | 79 | 321 | 0.5024 |
0.6119 |
| AF-Q09913-F1-model_v4 | 3 | 264 | 92 | 342 | 0.4932 |
0.5997 |
| AF-Q5AD02-F1-model_v4 | 4 | 262 | 89 | 342 | 0.4872 |
0.5867 |
| AF-A0A0N4STS3-F1-model_v4 | 107 | 263 | 163 | 310 | 0.4226 |
0.8027 |
| AF-Q8CY62-F1-model_v4 | 103 | 266 | 751 | 901 | 0.2983 |
0.8054 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 265 | 35 | 372 | 0.57 |
0.922 |
| A0A2G4YLU0 | CBM47 | 107 | 266 | 23 | 170 | 0.5534 |
0.8359 |
| AF-A0A6C0Q9X5-F1-model_v4 | CBM32 , GH16 | 5 | 263 | 44 | 348 | 0.4573 |
0.5904 |
| A0A9E9K109 | CBM32 | 8 | 266 | 1 | 561 | 0.4447 |
0.6266 |
| AF-B3E2Q6-F1-model_v4 | CBM47 | 22 | 266 | 20 | 287 | 0.3972 |
0.5781 |
| AF-A0A061B3V4-F1-model_v4 | AA14 | 3 | 260 | 144 | 456 | 0.3964 |
0.6305 |
| AF-E0S0U5-F1-model_v4 | GH43_33 | 26 | 262 | 235 | 488 | 0.3835 |
0.5579 |
| AF-A0A6H0CXL7-F1-model_v4 | CBM32 , GH16_3 | 3 | 263 | 52 | 346 | 0.3786 |
0.5457 |
| AF-W9JP00-F1-model_v4 | GH142 | 56 | 263 | 54 | 665 | 0.3741 |
0.6706 |
| AF-A0A7G6XSK3-F1-model_v4 | CBM32 , GH0 | 1 | 261 | 477 | 924 | 0.3692 |
0.6083 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 265 | 35 | 372 | 0.57 |
0.922 |
| A0A2G4YLU0 | CBM47 | 107 | 266 | 23 | 170 | 0.5534 |
0.8359 |
| B3VLC2 | CBM47 | 104 | 265 | 125 | 271 | 0.4514 |
0.8159 |
| A0A9E9K109 | CBM32 | 8 | 266 | 1 | 561 | 0.4447 |
0.6266 |
| A0A6B9ZCG4 | CBM32 | 1 | 262 | 260 | 467 | 0.4404 |
0.7093 |
| F2VQW1 | CBM47 | 105 | 266 | 18 | 229 | 0.4393 |
0.7669 |
| Q1D2P6 | CBM32 | 12 | 260 | 109 | 407 | 0.4388 |
0.5739 |
| Q4SQR7 | CBM47 | 104 | 264 | 106 | 267 | 0.4373 |
0.7445 |
| A0A410GHY9 | CBM47 | 107 | 266 | 161 | 318 | 0.4284 |
0.7685 |
| ULB45196.1 | CBM47 | 3 | 265 | 17 | 238 | 0.4045 |
0.6534 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3TV70-F1-model_v4 | 108 | 263 | 1 | 140 | 0.6275 |
0.8391 |
| AF-Q6LPX9-F1-model_v4 | 4 | 263 | 80 | 330 | 0.5031 |
0.6028 |
| AF-Q5YP02-F1-model_v4 | 4 | 263 | 88 | 329 | 0.4984 |
0.6161 |
| AF-B7ICG5-F1-model_v4 | 4 | 264 | 88 | 336 | 0.4937 |
0.6008 |
| AF-Q09913-F1-model_v4 | 3 | 264 | 92 | 342 | 0.4932 |
0.5997 |