PROTEIN: HRGMv2_1535_6_34
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Protein File & Metadata
Source:
HRGMv2_1535_6_34.pdb
Genome ID:
Protein ID:
HRGMv2_1535_6_34
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Protein Sequence
MPVIGLSVVR QSGEIACEME RENEVTLSWR GGYQPGDKLV VRCDTVPVHL VMKLDVSLAE 60 SCVLLTQDTF EFPIPLDERQ KAYGKGWAFE DERHYACVRV EDPRETGAWG CLSRNSCDYE 120 GAAGLFPHAA SNIPMDNPQF IARNAIDGVI ETSSHGSWPH ESWGVAGRSD AWLKIDFGEP 180 VIADELRLYL RADFPHDTCW GSAQLELSDG SVVDLSLKKT GERQSFCLGG ARVSWVMLKR 240 LVKRAEDGFP ALSQIEIWGR RSKPAKSEAL 270
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-H2L2B8-F1-model_v4 | 59 | 269 | 20 | 186 | 0.5109 |
0.726 |
| AF-Q54VL5-F1-model_v4 | 4 | 270 | 87 | 351 | 0.496 |
0.5961 |
| AF-Q09913-F1-model_v4 | 3 | 264 | 92 | 342 | 0.4901 |
0.6 |
| AF-Q5AD02-F1-model_v4 | 3 | 262 | 88 | 342 | 0.4851 |
0.5851 |
| AF-P25335-F1-model_v4 | 3 | 260 | 92 | 343 | 0.4802 |
0.5857 |
| AF-A0A0R4ITS1-F1-model_v4 | 107 | 270 | 23 | 204 | 0.4383 |
0.7667 |
| AF-A0A3P7DPT5-F1-model_v4 | 1 | 269 | 7 | 337 | 0.4106 |
0.6238 |
| AF-A0A0K0ER77-F1-model_v4 | 1 | 266 | 49 | 375 | 0.4001 |
0.6212 |
| AF-A0A077Z4H2-F1-model_v4 | 2 | 270 | 42 | 393 | 0.3974 |
0.6174 |
| AF-Q18163-F1-model_v4 | 1 | 269 | 36 | 360 | 0.397 |
0.5944 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2G4YLU0 | CBM47 | 107 | 270 | 23 | 175 | 0.5674 |
0.8363 |
| B1C4D3 | GH105 | 1 | 266 | 35 | 373 | 0.5657 |
0.9221 |
| A0A9E9K109 | CBM32 | 8 | 270 | 1 | 545 | 0.4505 |
0.6314 |
| AF-A0A346DVI5-F1-model_v4 | CBM47 | 6 | 266 | 7 | 436 | 0.439 |
0.578 |
| AF-A0A5B9GFR0-F1-model_v4 | CBM47 | 7 | 266 | 8 | 436 | 0.424 |
0.56 |
| AF-A0A061B3V4-F1-model_v4 | AA14 | 3 | 260 | 144 | 456 | 0.3932 |
0.6321 |
| AF-A0A7H8JXZ3-F1-model_v4 | GH20 | 1 | 261 | 37 | 658 | 0.387 |
0.5708 |
| AF-W5W840-F1-model_v4 | GH142 | 56 | 262 | 76 | 682 | 0.3697 |
0.6795 |
| AF-S0E6V6-F1-model_v4 | GH142 | 56 | 259 | 65 | 670 | 0.3692 |
0.6849 |
| AF-A0A7G6XSK3-F1-model_v4 | CBM32 , GH0 | 1 | 261 | 477 | 924 | 0.3671 |
0.6109 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2G4YLU0 | CBM47 | 107 | 270 | 23 | 175 | 0.5674 |
0.8363 |
| B1C4D3 | GH105 | 1 | 266 | 35 | 373 | 0.5657 |
0.9221 |
| A0A9E9K109 | CBM32 | 8 | 270 | 1 | 545 | 0.4505 |
0.6314 |
| UVH36227.1 | CBM47 | 2 | 265 | 194 | 490 | 0.4465 |
0.6163 |
| A0A6B9ZCG4 | CBM32 | 1 | 262 | 257 | 467 | 0.4377 |
0.7021 |
| C6W2B2 | CBM32 | 1 | 260 | 265 | 478 | 0.4365 |
0.6934 |
| C7JFL3 | CBM47 | 7 | 266 | 9 | 436 | 0.4258 |
0.562 |
| A0A410GHY9 | CBM47 | 107 | 263 | 161 | 314 | 0.4219 |
0.7816 |
| A0A6F9BEL5 | CBM47 | 1 | 270 | 141 | 300 | 0.405 |
0.7942 |
| A0A975PG29 | CE20 | 5 | 263 | 111 | 664 | 0.3995 |
0.5941 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3cqo-assembly1.cif.gz_C | 107 | 270 | 1 | 178 | 0.4592 |
0.7767 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-H2L2B8-F1-model_v4 | 59 | 269 | 20 | 186 | 0.5109 |
0.726 |
| AF-Q92VC1-F1-model_v4 | 3 | 267 | 85 | 340 | 0.5025 |
0.6029 |
| AF-Q6LPX9-F1-model_v4 | 3 | 263 | 79 | 330 | 0.4998 |
0.6003 |
| AF-Q54VL5-F1-model_v4 | 4 | 270 | 87 | 351 | 0.496 |
0.5961 |
| AF-B7GV54-F1-model_v4 | 4 | 264 | 88 | 336 | 0.4952 |
0.6058 |
| AF-Q09913-F1-model_v4 | 3 | 264 | 92 | 342 | 0.4901 |
0.6 |
| AF-Q9RKU4-F1-model_v4 | 2 | 267 | 117 | 366 | 0.4844 |
0.6173 |
| AF-P25335-F1-model_v4 | 3 | 260 | 92 | 343 | 0.4802 |
0.5857 |
| AF-Q18163-F1-model_v4 | 1 | 269 | 36 | 360 | 0.397 |
0.5944 |