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PROTEIN: HRGMv2_1522_10_11

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Protein File & Metadata
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Source:
HRGMv2_1522_10_11.pdb
Genome ID:
HRGMv2_1522
Protein ID:
HRGMv2_1522_10_11

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRAFDVEMSR   RGFASALAAG   ALSLALVGCG   GGAAGAGSAA   GSAAAKPVEV   HVASLKGPTS 60
IGLVQFMDQA   ANGETDNEFD   FAINAAADEI   VPKVIQGDVD   IALVPANVAS   VLYNKTEGAV 120
QVIDINTLGV   LNVVTGDASV   ASFGDLAGHT   VYMTGKGTTP   EYVMNYLLER   AGLTGQVTLE 180
FKSEPTEVLS   ALLAHPSAVG   VLPEPFKTAA   IAKSEGKLSA   PVSLTDVWDE   LAGDTGSRLL 240
TGVTVVRRAF   AEEHPEAVAE   FLSCHEASVK   AVNAAPADWA   QAVVDAGIVD   NAAIAEKAIP 300
GCMLVCQTGK   DMKAALGGYL   QVLSDADASA   VGGKLPADDF   YYME 344
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F6W2-F1-model_v4 46 343 28 325 0.7548 0.8624
AF-Q9I0P2-F1-model_v4 43 344 19 306 0.7162 0.8376
AF-A0A0H3GZA9-F1-model_v4 45 344 25 310 0.7161 0.8446
AF-A0A0H3GP99-F1-model_v4 38 344 17 318 0.7154 0.8112
AF-A0A0D2GYL1-F1-model_v4 47 344 1 295 0.7098 0.805
AF-U7PRE8-F1-model_v4 44 344 14 321 0.6954 0.7944
AF-A0A0H3GR32-F1-model_v4 44 344 46 344 0.6952 0.8153
AF-U7Q5Y8-F1-model_v4 42 344 2 313 0.6925 0.7886
AF-U7PXF6-F1-model_v4 47 344 1 294 0.6891 0.8071
AF-Q9I0N8-F1-model_v4 45 344 24 308 0.688 0.8079
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A6I6IQC2-F1-model_v4 CBM50 48 298 114 358 0.4852 0.6871
AF-A0A4P6RLL9-F1-model_v4 GH23 19 294 8 426 0.4417 0.6169
AF-A0A1Y4PH24-F1-model_v4 GH23 19 294 21 443 0.4401 0.6214
AF-A0A0P0ETY4-F1-model_v4 GH23 17 294 31 450 0.4401 0.6205
AF-Q5LAZ1-F1-model_v4 GH23 16 294 22 443 0.4393 0.6131
AF-A0A1C7H7G1-F1-model_v4 GH23 20 294 23 443 0.4389 0.6222
AF-F7LTV0-F1-model_v4 GH23 17 294 24 443 0.4387 0.6159
AF-E1WT20-F1-model_v4 GH23 16 294 23 443 0.4376 0.6138
AF-D6D3U4-F1-model_v4 GH23 17 294 27 446 0.4374 0.6159
AF-Q64RE0-F1-model_v4 GH23 16 294 23 442 0.4368 0.6112
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
C8W6R6 CBM50 40 308 50 335 0.5318 0.6776
A0A345LWD2 GT4 35 318 12 297 0.52 0.6066
A0A1V0RU95 CBM50 48 298 115 360 0.4686 0.6625
A0A858SWS8 CBM50 33 298 90 353 0.4565 0.6013
A0A975KCS4 GH23 14 295 2 339 0.4326 0.6063
C6BRT1 GH23 32 297 30 474 0.4274 0.6364
E1YCM4 GH23 20 297 10 450 0.4258 0.6001
E6W0R0 GH23 24 296 18 452 0.425 0.6103
A0A9J6ZRE9 GH23 45 291 43 297 0.4234 0.663
A0A6G9IF37 GH23 45 297 48 469 0.4201 0.6534
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3hn0-assembly1.cif.gz_A 47 344 1 279 0.7966 0.8961
2x26-assembly2.cif.gz_B 46 343 1 286 0.7405 0.8366
2x26-assembly1.cif.gz_A 46 344 1 287 0.7225 0.8353
3un6-assembly1.cif.gz_A 47 344 1 283 0.6898 0.7889
3uif-assembly1.cif.gz_A 45 344 2 307 0.682 0.7841
3ksx-assembly1.cif.gz_A 45 344 1 289 0.6727 0.7563
7ahr-assembly1.cif.gz_A 47 344 5 280 0.6677 0.7735
6st1-assembly2.cif.gz_B 49 344 1 295 0.6606 0.7391
7an6-assembly1.cif.gz_B 47 344 5 282 0.6605 0.7612
7an9-assembly1.cif.gz_B 48 344 1 277 0.6592 0.7545
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0SP84-F1-model_v4 45 344 28 325 0.698 0.8094
AF-A9WGD2-F1-model_v4 45 344 42 344 0.6835 0.8048
AF-Q9KXN1-F1-model_v4 46 343 1 282 0.6795 0.7711
AF-P75853-F1-model_v4 39 344 16 311 0.669 0.768
AF-Q5SI12-F1-model_v4 48 342 1 272 0.6519 0.7518
AF-Q8FUN4-F1-model_v4 43 344 19 317 0.6503 0.7404
AF-Q576E1-F1-model_v4 43 344 19 317 0.6442 0.7343
AF-Q5ZV75-F1-model_v4 46 344 5 297 0.6438 0.7453
AF-Q47537-F1-model_v4 46 344 20 317 0.6423 0.7359
AF-Q2YJB6-F1-model_v4 43 344 19 317 0.642 0.732
Download Full SwissProt Results