PROTEIN: HRGMv2_1488_14_42
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Protein File & Metadata
Source:
HRGMv2_1488_14_42.pdb
Genome ID:
Protein ID:
HRGMv2_1488_14_42
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Protein Sequence
MKQSKRHIRA KVTNADRSND HISWMTADGA SLYSDKSNKL YLFAFALYLI AYNLNFTTFR 60 ELSILHLDVF YLGVRVFCTI VLIALILRSG FSRWQIALFS ICACIIISST VFSGSWNILL 120 LFLFVVAGDD IDVRDIAAVS FWCSLGVIVV TVSAATVGFI STVTMNSLNN TLRQAPGFTH 180 PNSLGVLLLS MTCAFTVLRF RKATLVDLLF YGFMYYLCRV VVFSRTSALC MLLLASLAIL 240 ATLLRGRVFD RLLIALGIGA FIFLSITTYY FMYSYNPSVG WMRELDSVLS ARLALMHYFT 300 VSFPPVPFGF DFDGVSIRFG IFTTFLVDNA YAHLVLESGI LVAILMDVAW LATLAQAFRC 360 GELSPAIFGL IIFSFVAFCE TSAFFICINF NLIGISEALY SMRREKSISV CTVGAFHD 418
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 28 | 398 | 3 | 383 | 0.6674 |
0.7731 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A2S058-F1-model_v4 | GH39 | 31 | 410 | 1 | 407 | 0.6713 |
0.7625 |
| AF-A0A7D6J0J0-F1-model_v4 | GT4 | 31 | 408 | 15 | 423 | 0.6616 |
0.7553 |
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 23 | 418 | 16 | 744 | 0.6611 |
0.9008 |
| B7AUF6 | GT4 | 27 | 404 | 9 | 379 | 0.591 |
0.8777 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 33 | 405 | 17 | 417 | 0.504 |
0.7568 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 33 | 405 | 17 | 417 | 0.503 |
0.7559 |
| AF-M4X4V7-F1-model_v4 | GH39 | 35 | 407 | 18 | 419 | 0.5021 |
0.7542 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A2S058 | GH39 | 31 | 410 | 1 | 407 | 0.6713 |
0.7625 |
| A0A7D6J0J0 | GT4 | 31 | 408 | 15 | 423 | 0.6616 |
0.7553 |
| A0A7L9SQD7 | GT4 | 23 | 418 | 16 | 744 | 0.6611 |
0.9008 |
| B7AUF6 | GT4 | 27 | 404 | 9 | 379 | 0.591 |
0.8777 |
| M4X4V7 | GH39 | 35 | 407 | 18 | 419 | 0.5021 |
0.7542 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q02729-F1-model_v4 | 25 | 408 | 1 | 406 | 0.6292 |
0.7147 |