PROTEIN: HRGMv2_1040_27_21
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Protein File & Metadata
Source:
HRGMv2_1040_27_21.pdb
Genome ID:
Protein ID:
HRGMv2_1040_27_21
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Protein Sequence
MGSQSLRVAF ARADVTPNRP CRMGGYNRKK LSEGVLDPIE VNVVAAEVGG VPFVLAVLDS 60 IMVSEEFARR LQARVAEACA VPCANIVACA IHTHSAPAFF KLAFEETPAE GGLTERLLDR 120 TTRLCIDAVA DLRPAVCTME RMEVEGLYGN RNIEGGLADK SCTVLTFTGD DGKVLGKLLN 180 ISTHPTILSG SNLMLSADLI GQVRMRLEDA WGVSVVCANG ICGDVSTRFY RQGSGVPELE 240 RTAEELAGQI VAKLTPVAID LDLPVSGEIR MPVVYDARID ADCASALERA QTDPDVPWNK 300 FIIERVAFKR QISPIEMTLI SRYAVMGDLV IVTMPCDTCS ALGLKIKRAF SGREVIVIGY 360 ANTYCNYLVP EEDYGKYFET MNARMARGQA DRFVERVIDA VHAAL 405
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5K4ERM4-F1-model_v4 | 1 | 405 | 23 | 550 | 0.7393 |
0.8925 |
| AF-O06769-F1-model_v4 | 5 | 405 | 1 | 492 | 0.7121 |
0.8856 |
| AF-Q9I596-F1-model_v4 | 2 | 405 | 25 | 511 | 0.7032 |
0.8846 |
| AF-Q9VA70-F1-model_v4 | 1 | 405 | 19 | 548 | 0.7014 |
0.896 |
| AF-Q54BK2-F1-model_v4 | 1 | 405 | 35 | 558 | 0.696 |
0.8936 |
| AF-Q55G11-F1-model_v4 | 1 | 405 | 41 | 564 | 0.6936 |
0.8922 |
| AF-K0EPA9-F1-model_v4 | 1 | 405 | 40 | 533 | 0.6932 |
0.8771 |
| AF-A0A3Q0KPD2-F1-model_v4 | 1 | 405 | 23 | 550 | 0.6928 |
0.8922 |
| AF-A0A0R0GS00-F1-model_v4 | 1 | 405 | 22 | 588 | 0.6861 |
0.8941 |
| AF-Q5W7F1-F1-model_v4 | 1 | 405 | 55 | 577 | 0.6843 |
0.8909 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A553JQQ1 | CBM0 , CBM92 | 2 | 405 | 32 | 528 | 0.6296 |
0.8964 |
| AF-A0A517MHD2-F1-model_v4 | CE0 | 1 | 405 | 38 | 475 | 0.6267 |
0.8456 |
| AF-A0A3G9EBB9-F1-model_v4 | CE0 | 4 | 405 | 38 | 464 | 0.6246 |
0.8398 |
| AF-A0A0H4PED2-F1-model_v4 | CE0 | 4 | 405 | 29 | 455 | 0.6217 |
0.8356 |
| AF-G0IWC7-F1-model_v4 | CE0 | 4 | 405 | 27 | 453 | 0.621 |
0.8336 |
| AF-A0A1H2G217-F1-model_v4 | GH13_23 | 4 | 405 | 1 | 415 | 0.6112 |
0.8661 |
| AF-A0A1H2CQD8-F1-model_v4 | GH13_23 | 4 | 405 | 1 | 434 | 0.6087 |
0.8671 |
| A0A7S9KUB8 | GT31 | 1 | 405 | 103 | 649 | 0.578 |
0.8897 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A553JQQ1 | CBM0 , CBM92 | 2 | 405 | 32 | 528 | 0.6296 |
0.8964 |
| A0A1H2CQD8 | GH13_23 | 4 | 405 | 1 | 434 | 0.6087 |
0.8671 |
| A0A7S9KUB8 | GT31 | 1 | 405 | 103 | 649 | 0.578 |
0.8897 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2zws-assembly1.cif.gz_A | 2 | 405 | 1 | 472 | 0.7198 |
0.8848 |
| 2zxc-assembly2.cif.gz_B | 2 | 405 | 1 | 486 | 0.7133 |
0.884 |
| 4wgk-assembly2.cif.gz_B | 3 | 405 | 1 | 520 | 0.7079 |
0.8934 |
| 4wgk-assembly1.cif.gz_A | 4 | 405 | 1 | 519 | 0.7074 |
0.8939 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O06769-F1-model_v4 | 5 | 405 | 1 | 492 | 0.7121 |
0.8856 |
| AF-Q9I596-F1-model_v4 | 2 | 405 | 25 | 511 | 0.7032 |
0.8846 |
| AF-Q29C43-F1-model_v4 | 1 | 405 | 20 | 548 | 0.7018 |
0.896 |
| AF-Q9VA70-F1-model_v4 | 1 | 405 | 19 | 548 | 0.7014 |
0.896 |
| AF-Q54BK2-F1-model_v4 | 1 | 405 | 35 | 558 | 0.696 |
0.8936 |
| AF-Q55G11-F1-model_v4 | 1 | 405 | 41 | 564 | 0.6936 |
0.8922 |
| AF-Q5W7F1-F1-model_v4 | 1 | 405 | 55 | 577 | 0.6843 |
0.8909 |
| AF-Q304B9-F1-model_v4 | 2 | 405 | 22 | 601 | 0.6797 |
0.8926 |
| AF-Q9JHE3-F1-model_v4 | 2 | 405 | 74 | 594 | 0.6795 |
0.8918 |
| AF-Q91XT9-F1-model_v4 | 2 | 405 | 79 | 599 | 0.6779 |
0.8917 |