PROTEIN: HRGMv2_1024_33_11
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Protein File & Metadata
Source:
HRGMv2_1024_33_11.pdb
Genome ID:
Protein ID:
HRGMv2_1024_33_11
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Protein Sequence
MGYRILLMAP TFFGYRDRVC DELSRQGHSV VCIDDRPSES VSFRSLAKIS YRLVDGQIAK 60 YAESLKEKVA SGDYDLLIFM GGMSFCFTRD QFSSIRSASN ARFVSYLWDA FNNCERFGAC 120 RDLFDDVYSF EPSDCERYGL KFRPLFFSGA YDDLPLVPDG GFTYDACFIG SVHQPSKFEA 180 VSSICDNLES QGLRVFRYFF MPSKSAALLR RLTNSAYRGV EFSFDSLPAE KIVEIYARSK 240 AIVDSPQAGQ RGLTMRTLET IGAHRKLITA NPDAALYDFA SKGDVAVWRG KGSVSPQFFT 300 TPYRELPDEV YRSYSIETFV NALLGNEPAY KGYEKGNL 338
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P27126-F1-model_v4 | 3 | 327 | 1 | 308 | 0.7609 |
0.8226 |
| AF-A0A133CNC9-F1-model_v4 | 1 | 338 | 1 | 298 | 0.7204 |
0.789 |
| AF-Q5FAD9-F1-model_v4 | 3 | 327 | 1 | 352 | 0.7106 |
0.7777 |
| AF-Q5F734-F1-model_v4 | 1 | 327 | 2 | 354 | 0.7102 |
0.773 |
| AF-K0EX89-F1-model_v4 | 3 | 327 | 1 | 360 | 0.6956 |
0.7725 |
| AF-K0EZX0-F1-model_v4 | 1 | 327 | 6 | 361 | 0.6923 |
0.7651 |
| AF-A0A1A7SPW8-F1-model_v4 | 1 | 327 | 3 | 374 | 0.6912 |
0.7727 |
| AF-K0F3N9-F1-model_v4 | 3 | 327 | 1 | 360 | 0.69 |
0.7716 |
| AF-P9WMZ5-F1-model_v4 | 3 | 327 | 1 | 364 | 0.6894 |
0.7754 |
| AF-Q9HZ80-F1-model_v4 | 3 | 327 | 1 | 407 | 0.6888 |
0.8025 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A385JMF7-F1-model_v4 | GT4 | 1 | 328 | 2 | 357 | 0.7549 |
0.8226 |
| AF-A0A2Z2I027-F1-model_v4 | GT4 | 3 | 327 | 1 | 310 | 0.7358 |
0.7956 |
| S7UZI9 | GT4 | 1 | 327 | 1 | 355 | 0.7288 |
0.8023 |
| WDY52650.1 | GT4 | 1 | 329 | 1 | 361 | 0.7286 |
0.797 |
| AF-L8BAH0-F1-model_v4 | GT4 | 1 | 327 | 3 | 354 | 0.7284 |
0.8006 |
| AF-A0A0E1KTQ9-F1-model_v4 | GT4 | 3 | 327 | 1 | 355 | 0.7272 |
0.8054 |
| AF-A0A2K9LCL5-F1-model_v4 | GT4 | 1 | 327 | 2 | 359 | 0.727 |
0.8027 |
| A0A8I0HI30 | GT4 | 3 | 327 | 1 | 355 | 0.7267 |
0.8049 |
| AF-A0A127BA54-F1-model_v4 | GT4 | 3 | 333 | 1 | 374 | 0.7265 |
0.8004 |
| AF-A0A0X8X468-F1-model_v4 | GT4 | 1 | 329 | 7 | 385 | 0.7263 |
0.815 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A385JMF7 | GT4 | 1 | 328 | 2 | 357 | 0.7549 |
0.8226 |
| C7NM40 | GT4 | 3 | 328 | 1 | 307 | 0.7317 |
0.7928 |
| A0A5J6T047 | GT4 | 1 | 332 | 16 | 352 | 0.7302 |
0.7813 |
| S7UZI9 | GT4 | 1 | 327 | 1 | 355 | 0.7288 |
0.8023 |
| WDY52650.1 | GT4 | 1 | 329 | 1 | 361 | 0.7286 |
0.797 |
| A0A517ZNA7 | GT4 | 3 | 327 | 1 | 340 | 0.7278 |
0.7908 |
| A0A7M1WPR4 | GT4 | 1 | 327 | 1 | 357 | 0.7269 |
0.7964 |
| A0A8I0HI30 | GT4 | 3 | 327 | 1 | 355 | 0.7267 |
0.8049 |
| A0A127BA54 | GT4 | 3 | 333 | 1 | 374 | 0.7265 |
0.8004 |
| A0A0X8X468 | GT4 | 1 | 329 | 7 | 385 | 0.7263 |
0.815 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5d01-assembly1.cif.gz_B | 1 | 327 | 1 | 356 | 0.7035 |
0.7698 |
| 5d00-assembly1.cif.gz_A | 1 | 327 | 1 | 356 | 0.6986 |
0.7657 |
| 5d01-assembly1.cif.gz_A | 1 | 327 | 1 | 353 | 0.6963 |
0.76 |
| 3mbo-assembly3.cif.gz_F | 1 | 327 | 1 | 362 | 0.6948 |
0.7697 |
| 6zj7-assembly1.cif.gz_AAA | 1 | 329 | 22 | 388 | 0.6901 |
0.7803 |
| 3ot5-assembly5.cif.gz_A | 1 | 332 | 1 | 372 | 0.639 |
0.7057 |
| 3ot5-assembly6.cif.gz_D | 1 | 332 | 1 | 371 | 0.6334 |
0.6994 |
| 1nlm-assembly1.cif.gz_B | 3 | 327 | 1 | 347 | 0.6253 |
0.6871 |
| 1v4v-assembly1.cif.gz_B | 2 | 332 | 1 | 372 | 0.6211 |
0.689 |
| 3dzc-assembly1.cif.gz_B | 1 | 326 | 1 | 371 | 0.6191 |
0.6959 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P27126-F1-model_v4 | 3 | 327 | 1 | 308 | 0.7609 |
0.8226 |
| AF-Q4JAK2-F1-model_v4 | 2 | 327 | 1 | 348 | 0.7038 |
0.764 |
| AF-P9WMZ1-F1-model_v4 | 3 | 327 | 1 | 382 | 0.6825 |
0.7762 |
| AF-D4GU66-F1-model_v4 | 8 | 328 | 1 | 369 | 0.675 |
0.7651 |
| AF-P26388-F1-model_v4 | 3 | 327 | 1 | 403 | 0.6654 |
0.7722 |
| AF-Q8P804-F1-model_v4 | 1 | 327 | 15 | 337 | 0.6554 |
0.7189 |
| AF-P71243-F1-model_v4 | 3 | 327 | 1 | 403 | 0.6543 |
0.7598 |
| AF-Q3M9U1-F1-model_v4 | 3 | 328 | 1 | 486 | 0.6489 |
0.8071 |
| AF-P72623-F1-model_v4 | 3 | 329 | 1 | 488 | 0.6487 |
0.8043 |
| AF-P32057-F1-model_v4 | 2 | 328 | 1 | 406 | 0.6411 |
0.743 |