dbCAN Logo

PROTEIN: HRGMv2_1019_27_12

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_1019_27_12.pdb
Genome ID:
HRGMv2_1019
Protein ID:
HRGMv2_1019_27_12

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MLGLSVVAGD   GSVRCRFEGT   DEVRLAWRGA   YEPGDKIVLT   ADAAREHMVV   KLDAALETSH 60
VLLQGGRFEF   PVPFGDDRKP   YGAQAFTGER   HNAFARVEDA   REVSAWRNLA   LNACDLTHAD 120
DASGAALFPH   ATTNVVPGNP   QFIARNAIDG   VVAPELHGSW   PHASWGVAGR   QDAWLQVEFG 180
EPVVADELRL   YLRADFPHDT   CWEHAHVLLS   DGIELVLDLD   KTGERQTFDL   GGRTIEWLRI 240
SRLKKRDEEG   FPGLAQIEVW   GRRGDE 266
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q3TV70-F1-model_v4 105 265 1 140 0.6327 0.8465
AF-Q9I3J8-F1-model_v4 1 266 81 332 0.5024 0.6011
AF-Q5AD02-F1-model_v4 2 264 88 342 0.4863 0.583
AF-U7PMW0-F1-model_v4 2 265 100 358 0.4837 0.5819
AF-P25335-F1-model_v4 2 262 92 343 0.4815 0.5834
AF-A0A0R4IY57-F1-model_v4 100 262 132 306 0.437 0.7538
AF-A0A0R4ITS1-F1-model_v4 100 266 83 319 0.4321 0.7409
AF-A0A0N4STS3-F1-model_v4 104 265 163 310 0.4246 0.8051
AF-Q95ZV7-F1-model_v4 1 266 39 357 0.413 0.6259
AF-A0A0H5S3B6-F1-model_v4 1 266 9 330 0.4107 0.6239
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
B1C4D3 GH105 1 266 37 371 0.5704 0.9195
A0A2G4YLU0 CBM47 104 266 23 168 0.5559 0.8506
A0A9E9K109 CBM32 7 266 1 493 0.4378 0.6146
AF-G8NYI7-F1-model_v4 GH43_29 26 266 90 517 0.3925 0.578
AF-A0A061B3V4-F1-model_v4 AA14 9 262 24 456 0.3888 0.6281
AF-E0S0U5-F1-model_v4 GH43_33 25 263 236 487 0.3838 0.5547
AF-A0A7H8JXZ3-F1-model_v4 GH20 1 263 40 658 0.3836 0.5571
AF-W5W840-F1-model_v4 GH142 54 264 76 682 0.3765 0.6739
AF-W9JP00-F1-model_v4 GH142 55 265 55 665 0.3757 0.6677
AF-C7QBZ7-F1-model_v4 CBM32 , GH30_3 3 263 285 660 0.3685 0.5397
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
B1C4D3 GH105 1 266 37 371 0.5704 0.9195
A0A2G4YLU0 CBM47 104 266 23 168 0.5559 0.8506
UVH36227.1 CBM47 1 266 195 489 0.4452 0.6069
Q1D2P6 CBM32 10 262 109 407 0.4418 0.5692
F2VQW1 CBM47 98 265 76 314 0.4389 0.7414
A0A9E9K109 CBM32 7 266 1 493 0.4378 0.6146
C6W2B2 CBM32 1 262 266 478 0.4368 0.6915
Q2LK84 CBM47 101 262 132 306 0.4316 0.748
A0A410GHY9 CBM47 104 265 161 314 0.4256 0.7829
A0A6B8RL96 CBM32 , GH26 1 264 42 482 0.3995 0.5257
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1o59-assembly1.cif.gz_A 2 262 85 318 0.4847 0.6085
3cqo-assembly1.cif.gz_C 104 266 1 150 0.4508 0.8228
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q3TV70-F1-model_v4 105 265 1 140 0.6327 0.8465
AF-Q58DU8-F1-model_v4 105 265 1 140 0.6275 0.8398
AF-A6V7Y9-F1-model_v4 2 266 81 332 0.5081 0.6077
AF-Q02JZ8-F1-model_v4 1 266 81 332 0.5062 0.604
AF-B7UW33-F1-model_v4 1 266 81 332 0.5033 0.6017
AF-Q9I3J8-F1-model_v4 1 266 81 332 0.5024 0.6011
AF-Q4K8H3-F1-model_v4 2 265 81 331 0.4999 0.5997
AF-Q6LPX9-F1-model_v4 2 265 80 330 0.4998 0.5995
AF-Q48KS4-F1-model_v4 2 265 81 331 0.4996 0.5998
AF-Q87YX4-F1-model_v4 2 265 81 331 0.4994 0.5998
Download Full SwissProt Results