PROTEIN: HRGMv2_0980_17_22
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Protein File & Metadata
Source:
HRGMv2_0980_17_22.pdb
Genome ID:
Protein ID:
HRGMv2_0980_17_22
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Protein Sequence
MTRLNCEHNG SKKLDSKMSL LSYRVSDFIL FNIFFLLAFQ NAFQKLFGGV FAYIDELTAL 60 LLCCWAVFSM HGQKTRYCMI SRYLLLINSL LLLLGLCGNL LYKLQPAYQA IAIDAFACSK 120 FIISLISSVV ILQKRSVIEL ASSFAKFILP LLLILYFLNQ FIDLGLSSGE RLGYSFLFGH 180 PTNFAATVVC LISILLLDVK SNRLFIVSGL LVLCATGRFK AIGFAFIIAA AVFLYSNKKK 240 IPLSFILLAG CGALFLVYDQ ISLYFFDSTT ARSVLLSTSF DVANMHWPLG SGLATYGSNA 300 SADYYSSFYY SLGFPSVYGL GPMNHDYLVD SFWPAVIGQC GYIGLLLVAI IFVLLFSMSR 360 KAVDHGVPLW ASFAIPIYLL IASTSEASIF SSYSVLLAMT FAMLTADSNP FHVGESDE 418
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A212QE91-F1-model_v4 | GT2 | 20 | 418 | 2 | 436 | 0.5804 |
0.7529 |
| AF-M1FGR5-F1-model_v4 | GT2 | 21 | 417 | 4 | 505 | 0.5788 |
0.7558 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 20 | 418 | 2 | 436 | 0.5785 |
0.7498 |
| AF-E4PMS8-F1-model_v4 | GT2 | 20 | 417 | 2 | 505 | 0.5759 |
0.7484 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 24 | 417 | 1 | 499 | 0.5739 |
0.7509 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 20 | 417 | 2 | 504 | 0.5736 |
0.7441 |
| AF-A0A346S464-F1-model_v4 | GT2 | 20 | 417 | 2 | 504 | 0.5715 |
0.7433 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 20 | 417 | 5 | 507 | 0.5656 |
0.7356 |
| QSP96058.1 | GT2 | 22 | 417 | 7 | 510 | 0.5626 |
0.736 |
| WBY01952.1 | GT9 | 10 | 418 | 2 | 560 | 0.5533 |
0.7362 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 22 | 417 | 7 | 510 | 0.5626 |
0.736 |
| A0A517MXC4 | GT26 | 21 | 417 | 19 | 452 | 0.5548 |
0.7515 |
| WBY01952.1 | GT9 | 10 | 418 | 2 | 560 | 0.5533 |
0.7362 |
| A0A2P1NHY6 | GT4 | 10 | 418 | 11 | 449 | 0.5386 |
0.7367 |
| D5MJ04 | GT9 | 23 | 418 | 26 | 546 | 0.536 |
0.7357 |
| B8IGI7 | GH16_7 | 23 | 418 | 19 | 463 | 0.5091 |
0.717 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 23 | 417 | 2 | 379 | 0.6855 |
0.7462 |
| AF-P44067-F1-model_v4 | 21 | 406 | 3 | 399 | 0.6577 |
0.7162 |
| AF-Q00474-F1-model_v4 | 48 | 408 | 4 | 391 | 0.6377 |
0.7351 |