PROTEIN: HRGMv2_0979_6_42
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Protein File & Metadata
Source:
HRGMv2_0979_6_42.pdb
Genome ID:
Protein ID:
HRGMv2_0979_6_42
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Protein Sequence
MKCLVIDRPY MGIGGIENIQ IQLLKYCIDQ GYRVIWLTTK EHEKSSAYKN ITDAHEVEKH 60 YLKRTPFGPI YPSLKFADDE DVVVLTTDLL RYCISQHVMK DWQCHTVSHL LTIPHFKGGA 120 VLPETCLRSG RTRERWRLRL SNAAKWIDRT GNLIGFSDIH LTAYEKEYGL NVANKESKVL 180 KAIFPLDAPA DEIIEQKAKS RRDEFNIITC ARFDFPHKGY MLGLIKEFSD IYERHPEARL 240 FIVGYGQGEK QVKDALSRLP EAARSQVVLT GPLSPEQLKT KMLSCHLNVG VAGSLWRGAE 300 CALPSICMRH YTYECEGYGF IDDVGDIMSD SAGFNVVPLI ENVIKMDDSA YIEKSIKSFN 360 AAQSQIDVDP EFVFKLPATN LDTFPLSELE ARGMFFQRLL LERICKRSMY EDQLNASK 418
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FZG8-F1-model_v4 | 1 | 379 | 1 | 361 | 0.7244 |
0.7946 |
| AF-Q5F734-F1-model_v4 | 1 | 377 | 4 | 354 | 0.7106 |
0.7943 |
| AF-O05083-F1-model_v4 | 1 | 377 | 1 | 353 | 0.7007 |
0.7779 |
| AF-Q5FAD9-F1-model_v4 | 2 | 379 | 1 | 354 | 0.6957 |
0.7728 |
| AF-Q2G255-F1-model_v4 | 2 | 380 | 1 | 374 | 0.6943 |
0.7583 |
| AF-K0F3N9-F1-model_v4 | 1 | 388 | 1 | 374 | 0.6877 |
0.7455 |
| AF-P9WMZ5-F1-model_v4 | 2 | 388 | 1 | 378 | 0.6852 |
0.7393 |
| AF-Q7AQE2-F1-model_v4 | 1 | 379 | 1 | 380 | 0.6795 |
0.7396 |
| AF-Q2G1K0-F1-model_v4 | 1 | 379 | 1 | 369 | 0.6771 |
0.7411 |
| AF-K0EXF1-F1-model_v4 | 1 | 378 | 1 | 375 | 0.6742 |
0.7342 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V1LBX6 | GT4 | 3 | 418 | 1 | 423 | 0.7924 |
0.8234 |
| AF-A0A8B3Y576-F1-model_v4 | GT4 | 1 | 415 | 1 | 401 | 0.7891 |
0.8305 |
| AF-A0A1H0CS45-F1-model_v4 | GT4 | 1 | 416 | 1 | 401 | 0.7872 |
0.8283 |
| AF-A0A7M1K9G2-F1-model_v4 | GT4 | 1 | 414 | 1 | 401 | 0.7862 |
0.828 |
| AF-A0A3G7WWG6-F1-model_v4 | GT4 | 1 | 415 | 1 | 403 | 0.7851 |
0.8227 |
| AF-A0A2L1JHC4-F1-model_v4 | GT4 | 1 | 415 | 1 | 403 | 0.7788 |
0.818 |
| A0A4Y6RGF3 | GT4 | 1 | 416 | 4 | 423 | 0.7774 |
0.8089 |
| BCN16624.1 | GT4 | 3 | 418 | 1 | 422 | 0.7656 |
0.7986 |
| A0A9E8BXD5 | GT4 | 1 | 414 | 2 | 406 | 0.7613 |
0.8003 |
| AF-B8EDA6-F1-model_v4 | GT0 | 3 | 417 | 1 | 423 | 0.7579 |
0.7942 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V1LBX6 | GT4 | 3 | 418 | 1 | 423 | 0.7924 |
0.8234 |
| A0A4Y6RGF3 | GT4 | 1 | 416 | 4 | 423 | 0.7774 |
0.8089 |
| BCN16624.1 | GT4 | 3 | 418 | 1 | 422 | 0.7656 |
0.7986 |
| A0A9E8BXD5 | GT4 | 1 | 414 | 2 | 406 | 0.7613 |
0.8003 |
| A0A0Q0F2P9 | GT4 | 3 | 418 | 1 | 418 | 0.754 |
0.789 |
| A0A220UNS2 | GT4 | 1 | 403 | 1 | 393 | 0.7491 |
0.7983 |
| K9NG54 | GT4 | 3 | 418 | 1 | 421 | 0.7461 |
0.7794 |
| AMH18747.1 | GT4 | 1 | 413 | 1 | 409 | 0.7433 |
0.7801 |
| A0A060NH40 | GT4 | 1 | 418 | 22 | 440 | 0.7376 |
0.781 |
| A0A7U4LG59 | GT4 | 1 | 412 | 14 | 412 | 0.735 |
0.7892 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7mi0-assembly1.cif.gz_A | 1 | 380 | 3 | 378 | 0.6946 |
0.7539 |
| 5d00-assembly1.cif.gz_B | 1 | 379 | 2 | 361 | 0.6901 |
0.7611 |
| 6n1x-assembly1.cif.gz_A | 1 | 380 | 4 | 377 | 0.6897 |
0.7511 |
| 3mbo-assembly4.cif.gz_H | 1 | 381 | 1 | 369 | 0.6893 |
0.7509 |
| 3mbo-assembly1.cif.gz_A | 1 | 381 | 2 | 372 | 0.6889 |
0.7496 |
| 6ejj-assembly1.cif.gz_A | 1 | 381 | 2 | 360 | 0.6865 |
0.7583 |
| 5d00-assembly1.cif.gz_A | 1 | 380 | 2 | 361 | 0.6855 |
0.756 |
| 5d01-assembly1.cif.gz_B | 1 | 379 | 2 | 360 | 0.6825 |
0.7532 |
| 3mbo-assembly1.cif.gz_B | 1 | 380 | 1 | 367 | 0.6807 |
0.747 |
| 5d01-assembly1.cif.gz_A | 1 | 380 | 2 | 357 | 0.6785 |
0.7519 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05083-F1-model_v4 | 1 | 377 | 1 | 353 | 0.7007 |
0.7779 |
| AF-Q81ST7-F1-model_v4 | 1 | 383 | 2 | 379 | 0.6964 |
0.7529 |
| AF-P71055-F1-model_v4 | 1 | 378 | 4 | 375 | 0.6906 |
0.7618 |
| AF-Q56774-F1-model_v4 | 1 | 379 | 1 | 371 | 0.6789 |
0.7493 |
| AF-Q8NNK8-F1-model_v4 | 1 | 379 | 4 | 381 | 0.6778 |
0.737 |
| AF-B2SUK8-F1-model_v4 | 1 | 379 | 1 | 371 | 0.6773 |
0.7483 |
| AF-Q93P60-F1-model_v4 | 1 | 380 | 1 | 391 | 0.6767 |
0.7451 |
| AF-Q6C3V7-F1-model_v4 | 1 | 406 | 1 | 458 | 0.6729 |
0.7457 |
| AF-A1R8N8-F1-model_v4 | 3 | 384 | 1 | 407 | 0.6702 |
0.743 |
| AF-Q4JAK2-F1-model_v4 | 1 | 380 | 1 | 351 | 0.668 |
0.747 |