PROTEIN: HRGMv2_0977_2_8
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Protein File & Metadata
Source:
HRGMv2_0977_2_8.pdb
Genome ID:
Protein ID:
HRGMv2_0977_2_8
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Protein Sequence
MGVITMNVHR DGSILRSADD RRVGLIGIAR RVEIKDLLIV IASMLAMFNY GSSWTGLTGS 60 QLTTLRLLIA LFACALVCFR VSWGELAHFE KAGLVYCGLV FVEGLFGKVS PGSAWVEGMV 120 GALLFIVPSE LRRKYGNELS GTTICLVACL LICVADVFAV ATGGKGVVTQ DNEYLFSSNY 180 IIGSKFLLSY MNMLCFAFIY WKIPSAITLV VFGSISFWIS ALVGCSTGVT GTVIMIIMIL 240 LSYPVRALPT HRLFLPILTV VLAIVAVAFT GLLTWGPFGR FITNVLGESS DLTGRIFIYP 300 VLIGLFVNRP LFGYLTANGA NQAVIGACGS ADAQEGLFHI LLTNGLIGVV LFLIMEYVSI 360 ERIRCMGRRE HGLYAFIVAM TVCSVVEINL GLPFILGLSF LASSLEVCE 409
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 30 | 408 | 10 | 387 | 0.6543 |
0.7398 |
| AF-Q5FA54-F1-model_v4 | 7 | 409 | 4 | 428 | 0.5643 |
0.6927 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9K0K0-F1-model_v4 | GT0 | 7 | 409 | 4 | 428 | 0.5642 |
0.6922 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 31 | 409 | 19 | 415 | 0.518 |
0.7579 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 31 | 409 | 19 | 415 | 0.5151 |
0.7531 |
| AF-M4X4V7-F1-model_v4 | GH39 | 31 | 409 | 19 | 415 | 0.5105 |
0.7478 |
| B7AUF6 | GT4 | 31 | 409 | 17 | 382 | 0.5092 |
0.7532 |
| AF-B5YD26-F1-model_v4 | GT9 | 30 | 409 | 40 | 446 | 0.5067 |
0.7149 |
| AF-B8DZR6-F1-model_v4 | GT9 | 30 | 409 | 40 | 446 | 0.5064 |
0.7141 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9ZDH0-F1-model_v4 | 33 | 409 | 1 | 405 | 0.6247 |
0.6971 |
| AF-Q68X15-F1-model_v4 | 33 | 407 | 1 | 400 | 0.6191 |
0.6942 |