PROTEIN: HRGMv2_0950_1_257
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Protein File & Metadata
Source:
HRGMv2_0950_1_257.pdb
Genome ID:
Protein ID:
HRGMv2_0950_1_257
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Protein Sequence
MHKIKENALS SIRIDDLFLF VVFNLLLFQP FLERFSDFAG YIDEIAFLSL LLLTAISARS 60 RKYGQFRRVD KVILVLMVVV ALLGIMGNYA AGVQLGLSPI LTDVFACFKV PLAFLALLRI 120 VGGETGCRSI ERLLSLESVV LLWIMALLAL ASTFVEFGMS DDEVRYGMHA FHFLYEHPES 180 VNFAAVSLLI MRMTSAPRSK AWIAAFVVAA LTLRTKAWCW IAVSLLILFL TTRSGKLKKR 240 YIVLCFFVAV AVAWNQFAAV FSPEASEQAR NALLKAAVTI ATVFFPFGAG FATFGTAVTA 300 TPAYYSPLYY QYGLSSVYGL SPTYPYFVCD SLWPAMLGEF GWIGLLLFFG IMLGMSFAVV 360 VRSKGRSSLA PVLIGVTYLW ISSMAESVLF APSGLLLITA LGLCLGFDHD RKEAKCSLA 419
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25682-F1-model_v4 | 10 | 415 | 8 | 429 | 0.6476 |
0.6981 |
| AF-P27243-F1-model_v4 | 12 | 415 | 19 | 419 | 0.6467 |
0.6971 |
| AF-P44067-F1-model_v4 | 9 | 406 | 2 | 399 | 0.6431 |
0.6848 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A212QE91-F1-model_v4 | GT2 | 9 | 419 | 2 | 413 | 0.5771 |
0.7305 |
| AF-M1FGR5-F1-model_v4 | GT2 | 9 | 419 | 3 | 513 | 0.5726 |
0.7265 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 9 | 419 | 2 | 413 | 0.5722 |
0.7243 |
| AF-E4PMS8-F1-model_v4 | GT2 | 9 | 419 | 2 | 512 | 0.5709 |
0.7225 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 9 | 419 | 2 | 511 | 0.5666 |
0.7161 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 12 | 419 | 1 | 507 | 0.5659 |
0.7188 |
| AF-A0A346S464-F1-model_v4 | GT2 | 7 | 419 | 1 | 512 | 0.5656 |
0.7135 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 9 | 419 | 5 | 514 | 0.5646 |
0.7152 |
| QSP96058.1 | GT2 | 9 | 419 | 8 | 518 | 0.5627 |
0.7143 |
| A0A9Q9IL13 | GT4 | 10 | 417 | 17 | 503 | 0.5456 |
0.7754 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 9 | 419 | 8 | 518 | 0.5627 |
0.7143 |
| A0A9Q9IL13 | GT4 | 10 | 417 | 17 | 503 | 0.5456 |
0.7754 |
| A0A517MXC4 | GT26 | 10 | 413 | 18 | 447 | 0.5324 |
0.7116 |
| WBY01952.1 | GT9 | 7 | 417 | 11 | 559 | 0.5292 |
0.7016 |
| A0A2P1NHY6 | GT4 | 2 | 416 | 17 | 446 | 0.5264 |
0.7115 |
| H8L3P3 | GT2 | 1 | 419 | 4 | 586 | 0.5227 |
0.6762 |
| D5MJ04 | GT9 | 10 | 419 | 24 | 566 | 0.5219 |
0.6958 |
| UII34295.1 | GT4 | 9 | 417 | 13 | 422 | 0.5032 |
0.6743 |
| A0A160T1R3 | GH39 | 5 | 419 | 585 | 1048 | 0.4992 |
0.7228 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 11 | 419 | 1 | 382 | 0.6702 |
0.7246 |
| AF-P27243-F1-model_v4 | 12 | 415 | 19 | 419 | 0.6467 |
0.6971 |
| AF-P44067-F1-model_v4 | 9 | 406 | 2 | 399 | 0.6431 |
0.6848 |
| AF-Q00474-F1-model_v4 | 36 | 419 | 4 | 399 | 0.6382 |
0.6989 |