PROTEIN: HRGMv2_0880_5_38
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Protein File & Metadata
Source:
HRGMv2_0880_5_38.pdb
Genome ID:
Protein ID:
HRGMv2_0880_5_38
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Protein Sequence
MHLFNSRADF DAQMKSVKKW MRTGQALDGV ADLQHDVAYS IGDSLVYWWV NAHEAVTADL 60 VGHRRYHAVL APLDGDLTVE VAPKADLTCT RAYSDIDDRE RFEGAGEKVT IPAGGVAVVE 120 IDEAYRVVAN AADSRVVVLH VTVEGYSFPN K 151
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC73-F1-model_v4 | 1 | 146 | 1 | 144 | 0.8995 |
0.9551 |
| AF-Q8CYF8-F1-model_v4 | 1 | 144 | 1 | 150 | 0.8102 |
0.8766 |
| AF-P45424-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8083 |
0.87 |
| AF-Q32BB8-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8067 |
0.8686 |
| AF-Q8ZLQ9-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8037 |
0.868 |
| AF-O25673-F1-model_v4 | 1 | 150 | 2 | 178 | 0.7992 |
0.8949 |
| AF-Q8ZL82-F1-model_v4 | 1 | 146 | 1 | 154 | 0.7931 |
0.8604 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7885 |
0.8538 |
| AF-Q8DNV1-F1-model_v4 | 1 | 144 | 1 | 150 | 0.7854 |
0.8532 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7776 |
0.8481 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4tsd-assembly1.cif.gz_A | 1 | 150 | 1 | 177 | 0.7922 |
0.8899 |
| 1s4c-assembly1.cif.gz_A | 1 | 146 | 1 | 150 | 0.7794 |
0.8396 |
| 1s4c-assembly2.cif.gz_B | 1 | 146 | 1 | 155 | 0.7755 |
0.8473 |
| 1s4c-assembly1.cif.gz_D | 1 | 146 | 1 | 140 | 0.775 |
0.8397 |
| 1s4c-assembly2.cif.gz_C | 1 | 146 | 1 | 147 | 0.7739 |
0.825 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC73-F1-model_v4 | 1 | 146 | 1 | 144 | 0.8995 |
0.9551 |
| AF-P0AC74-F1-model_v4 | 1 | 145 | 1 | 143 | 0.8985 |
0.9609 |
| AF-P45424-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8083 |
0.87 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7885 |
0.8538 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7776 |
0.8481 |