PROTEIN: HRGMv2_0811_32_17
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Protein File & Metadata
Source:
HRGMv2_0811_32_17.pdb
Genome ID:
Protein ID:
HRGMv2_0811_32_17
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Protein Sequence
MDIQFIKASP TQNVTILALT QVPRAIQPEI AAQLLRYDGV GGEQVGFIEE SKSARLRLQM 60 MGGEFCGNAS MAAGAYLALR EKLPSGANAE YPIEVSGVEG IVRVGIARTG KTFRGRVNMP 120 GAERIQRIDL NADSGVISAD AVFLPGIVHL ILPKKSGITL EEIERRICDW NGQIHADALG 180 ALIYDECEQS IEPVVYVPAS NTIVRERGCG SGTAAIGCLN AAQNGAFTAN ICQPGGEIKV 240 IAQMIGGKFS VQIEGNVSIV ASGTAYL 267
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FVE4-F1-model_v4 | 1 | 267 | 4 | 272 | 0.8641 |
0.8923 |
| AF-Q51564-F1-model_v4 | 1 | 267 | 1 | 276 | 0.8103 |
0.8421 |
| AF-P0A6K1-F1-model_v4 | 3 | 267 | 1 | 274 | 0.7987 |
0.8348 |
| AF-Q329Y5-F1-model_v4 | 2 | 267 | 1 | 275 | 0.7966 |
0.8317 |
| AF-A0A132Z6F5-F1-model_v4 | 3 | 267 | 1 | 266 | 0.7902 |
0.816 |
| AF-A0A0H3GKE3-F1-model_v4 | 3 | 267 | 1 | 274 | 0.7821 |
0.8203 |
| AF-P0A1F2-F1-model_v4 | 3 | 267 | 1 | 274 | 0.7812 |
0.8195 |
| AF-Q9I476-F1-model_v4 | 1 | 267 | 2 | 302 | 0.7797 |
0.8593 |
| AF-P40788-F1-model_v4 | 2 | 267 | 2 | 295 | 0.7774 |
0.8409 |
| AF-Q5F9Q4-F1-model_v4 | 1 | 267 | 2 | 282 | 0.7764 |
0.8197 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2V1AJ98 | GT39 | 2 | 265 | 1 | 278 | 0.4958 |
0.8021 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6jiw-assembly1.cif.gz_A-2 | 1 | 267 | 1 | 262 | 0.8879 |
0.9149 |
| 6jis-assembly1.cif.gz_A-2 | 1 | 267 | 1 | 263 | 0.8873 |
0.9117 |
| 6l4l-assembly1.cif.gz_A | 1 | 267 | 1 | 257 | 0.8639 |
0.9021 |
| 7vdy-assembly1.cif.gz_B | 1 | 267 | 1 | 278 | 0.8033 |
0.8406 |
| 5ha4-assembly1.cif.gz_A | 1 | 267 | 1 | 279 | 0.7901 |
0.8283 |
| 6d13-assembly1.cif.gz_A | 2 | 267 | 1 | 275 | 0.7889 |
0.825 |
| 4jci-assembly1.cif.gz_B | 1 | 267 | 2 | 298 | 0.784 |
0.8572 |
| 4j9x-assembly1.cif.gz_B | 1 | 267 | 2 | 298 | 0.781 |
0.857 |
| 1u0k-assembly1.cif.gz_B | 2 | 267 | 1 | 281 | 0.7805 |
0.8258 |
| 4juu-assembly1.cif.gz_B | 1 | 267 | 1 | 299 | 0.7802 |
0.8564 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3JU78-F1-model_v4 | 1 | 267 | 4 | 272 | 0.883 |
0.9089 |
| AF-Q64SY7-F1-model_v4 | 1 | 267 | 3 | 267 | 0.8225 |
0.8525 |
| AF-A6L8U3-F1-model_v4 | 1 | 267 | 3 | 269 | 0.8207 |
0.8449 |
| AF-Q8AAB7-F1-model_v4 | 1 | 267 | 3 | 267 | 0.8172 |
0.8457 |
| AF-O27389-F1-model_v4 | 2 | 267 | 1 | 284 | 0.8161 |
0.8657 |
| AF-B9KED6-F1-model_v4 | 3 | 267 | 1 | 248 | 0.815 |
0.8663 |
| AF-Q88CF3-F1-model_v4 | 1 | 267 | 1 | 276 | 0.8122 |
0.8439 |
| AF-B8GT89-F1-model_v4 | 1 | 267 | 1 | 278 | 0.8118 |
0.8466 |
| AF-B0C312-F1-model_v4 | 1 | 267 | 1 | 282 | 0.8117 |
0.8553 |
| AF-Q3AC09-F1-model_v4 | 3 | 267 | 1 | 274 | 0.8117 |
0.8477 |