dbCAN Logo

PROTEIN: HRGMv2_0793_1_11

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0793_1_11.pdb
Genome ID:
HRGMv2_0793
Protein ID:
HRGMv2_0793_1_11

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKKVMTIFLL   VALVAVYACS   LVACKPNGGY   EEVEGKTNIR   VATYNGGLGK   EWLETAAKEF 60
EKKYENKSFE   EGKTGVAVHV   EFCQSADLLI   NQSLKSNVYL   TELFDYYTWV   NDGKVADITD 120
AVKENLAEEF   GEDKTIESKL   DNQFVDFLTA   KDGKYYALPF   YDGFMGFVYD   VDWFCKQGYF 180
FKKGGGFTGD   MTQLAEGPDG   VVGTWDDGMP   ATYDDFTKLL   DKIEGDGGTP   LVYGSDATDY 240
WQKALTSWWA   NYEGKQNMLA   NWKLQGTFDR   VTAINGNNVT   TDKFTLDASN   VATSAKELQK 300
QPGKYYALRF   IDDVLCSKQT   NYNSTLYLEA   QSFLVNTGIN   QTNTKYSLLL   DGAWWENEAT 360
LNDVFEDASA   VDFNYNPADG   DYKSTRRFAM   MPVPRAYGQT   TENYKQTLYS   DNAAFAFVGS 420
NTVGAQLDVS   KLFMQYLHTD   AQLSAFTAKT   SIPRCLNYEI   FDTDEAKMTY   FGKYMMEMKA 480
ASDVVYPYSG   TDYYLRNSGS   FTLSNWGWKS   RISGIVRESP   FATIASSGGK   VTAEDYFKGL 540
YEAH 544
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F2T2-F1-model_v4 25 544 12 415 0.6932 0.8263
AF-Q8DNN7-F1-model_v4 26 544 26 429 0.6764 0.8199
AF-Q7AQ51-F1-model_v4 1 544 1 439 0.6712 0.7625
AF-Q8DNH8-F1-model_v4 30 544 26 412 0.667 0.8223
AF-A0A133CDW9-F1-model_v4 1 544 1 436 0.6659 0.7589
AF-A0A133CPC5-F1-model_v4 34 544 33 418 0.6637 0.8254
AF-Q9HZ48-F1-model_v4 33 544 21 416 0.6579 0.7968
AF-Q9CCA3-F1-model_v4 25 544 21 458 0.6576 0.7666
AF-A0A132Z3C8-F1-model_v4 32 544 28 423 0.6524 0.7976
AF-Q32AT3-F1-model_v4 33 544 20 426 0.6471 0.7816
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 544 27 791 0.5287 0.6352
A0A9Q8PNJ5 GH4 1 544 235 860 0.5261 0.651
AF-A0A7U1BNH7-F1-model_v4 GH10 33 544 27 734 0.5118 0.6324
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1Q2TKJ3 GH49 1 544 27 791 0.5287 0.6352
A0A9Q8PNJ5 GH4 1 544 235 860 0.5261 0.651
A0A7U1BNH7 GH10 33 544 27 734 0.5118 0.6324
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7eho-assembly2.cif.gz_B 36 544 1 397 0.7155 0.8445
3oo6-assembly2.cif.gz_B 35 544 1 386 0.6947 0.8291
7x0k-assembly1.cif.gz_A 36 544 1 400 0.6932 0.8184
4g68-assembly3.cif.gz_C 37 544 1 392 0.6915 0.8169
7c6r-assembly1.cif.gz_A 37 544 1 407 0.6893 0.809
3vxc-assembly1.cif.gz_A 38 544 1 398 0.6888 0.8093
7c71-assembly2.cif.gz_B 37 544 1 408 0.6887 0.8074
5dvf-assembly2.cif.gz_B 35 544 1 386 0.688 0.8205
5xpj-assembly1.cif.gz_A 35 544 1 386 0.686 0.8185
7c6z-assembly1.cif.gz_A 37 544 1 408 0.6854 0.8042
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9KEE7-F1-model_v4 19 544 27 440 0.6824 0.816
AF-Q92KZ7-F1-model_v4 33 544 19 411 0.6653 0.8052
AF-Q53684-F1-model_v4 34 544 26 417 0.6618 0.8368
AF-Q8FVX5-F1-model_v4 33 544 26 418 0.6605 0.8059
AF-O06875-F1-model_v4 33 544 26 418 0.6604 0.8058
AF-Q8YCE2-F1-model_v4 33 544 26 418 0.6604 0.8057
AF-Q98H33-F1-model_v4 34 544 21 414 0.6592 0.799
AF-O58758-F1-model_v4 33 544 43 417 0.6586 0.8357
AF-Q8FVS7-F1-model_v4 33 544 22 406 0.6558 0.8063
AF-Q578M8-F1-model_v4 33 544 22 406 0.6541 0.8044
Download Full SwissProt Results