dbCAN Logo

PROTEIN: HRGMv2_0755_44_8

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0755_44_8.pdb
Genome ID:
HRGMv2_0755
Protein ID:
HRGMv2_0755_44_8

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MPRGRVKIMN   KKAISLSMAA   FAAMFMLSAC   AGGTNDSTKK   EKPEMPVYNT   TEIFRIGNWG 60
VPPHENTGYM   EYANNPNYCT   VEEWTKMRDC   GFNLAIPTSG   VSREEIIRDL   EKADEVGMKV 120
LVRDQTDAGF   ETIIKYAQSR   GYSYEETRDE   LDRRAEEIKA   NIDEYKKYES   FQGVNAYDEP 180
SMDYYEAIAA   CQDWFLKYYP   EYEFYTNLLP   VYATPKQLFG   AFDGEGYAYP   DYVSKYVEEV 240
NPPSLSYDHY   PILQDWDESA   YIKEDFLYNL   NVFARQAKVS   KVPVYIYLQT   MGFFSNLPIS 300
TYEEFAWQCY   TSLAFGVRGI   MCFQYWTQLQ   AEYHNNVRGG   IVERDGTITP   LYYAVQEVFN 360
EIKAMQDVYL   HYKWDGVKTY   EGGRIINDMF   TLVTDQLESL   EKIRDVECDQ   DIIVGQFTDA 420
DDGYAYMVTN   ATAPFDPTEA   NVTLTFSDEY   DYVMVVAKGE   RELVALDNHV   LNVKVGSGEG 480
YFVVPVK 487
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8RX86-F1-model_v4 51 487 37 395 0.5826 0.7171
AF-C0NKE9-F1-model_v4 35 358 5 302 0.5787 0.734
AF-I1L3R4-F1-model_v4 51 487 69 426 0.5636 0.7186
AF-P15703-F1-model_v4 40 476 12 313 0.5616 0.7165
AF-I1L6Z0-F1-model_v4 34 477 46 489 0.5221 0.585
AF-A0A1D6EIX8-F1-model_v4 49 364 63 433 0.5174 0.7382
AF-Q6P1J0-F1-model_v4 52 423 97 452 0.4743 0.6231
AF-Q5F304-F1-model_v4 46 465 76 511 0.4611 0.5633
AF-A0A0K0DX16-F1-model_v4 1 366 11 523 0.4432 0.6115
AF-Q652P5-F1-model_v4 7 476 66 530 0.4346 0.487
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K6AWF3 GH111 49 486 55 503 0.698 0.7974
AF-B0C6E2-F1-model_v4 GH111 45 487 17 493 0.6915 0.7901
AF-A0A1G6TUH9-F1-model_v4 CBM66 50 487 50 622 0.6644 0.8319
AF-C5C1Z0-F1-model_v4 CBM66 50 487 51 625 0.6639 0.833
AF-A0A1H1MJK6-F1-model_v4 CBM66 50 487 72 659 0.6554 0.8413
AF-A0A7G5LS84-F1-model_v4 CBM66 50 486 74 642 0.6455 0.8202
AF-A0A7S8ITW2-F1-model_v4 GH27 50 487 21 378 0.6001 0.7244
AF-A0A7S8F7Z6-F1-model_v4 GH27 51 487 21 378 0.5994 0.7235
AF-A0A7S8IW12-F1-model_v4 GH27 50 487 21 378 0.5993 0.7239
AF-A0A7S8F871-F1-model_v4 GH27 51 487 21 378 0.5993 0.7234
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K6AWF3 GH111 49 486 55 503 0.698 0.7974
B0C6E2 GH111 45 487 17 493 0.6915 0.7901
A0A1H1MJK6 CBM66 50 487 72 659 0.6554 0.8413
A0A7G5LS84 CBM66 50 486 74 642 0.6455 0.8202
A0A140EH88 GH27 50 487 13 387 0.6002 0.7056
A0A3T1D741 CBM22 49 487 33 423 0.5977 0.9119
A0A7G8UNM4 CBM32 50 487 40 713 0.5967 0.8465
W0IZN8 GH39 51 487 30 494 0.5902 0.6763
WFB35353.1 GH39 50 487 5 474 0.5895 0.666
WJH32652.1 CBM22 48 487 32 438 0.5886 0.8902
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4nzf-assembly1.cif.gz_A 51 487 9 430 0.5839 0.6496
4zn2-assembly3.cif.gz_C 48 484 10 413 0.5766 0.6529
8iu8-assembly1.cif.gz_A 43 486 37 546 0.5746 0.6746
4h41-assembly1.cif.gz_B 13 459 1 322 0.5677 0.6929
4h41-assembly1.cif.gz_A 16 361 1 317 0.567 0.6973
4h41-assembly1.cif.gz_C 16 361 1 320 0.5656 0.6933
6t7g-assembly1.cif.gz_CCC 50 487 9 654 0.5616 0.7164
7omi-assembly2.cif.gz_FFF 50 486 6 650 0.5613 0.7163
6t6g-assembly2.cif.gz_EEE 50 486 6 650 0.5612 0.7151
6t75-assembly2.cif.gz_DDD 50 486 12 652 0.5609 0.717
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8RX86-F1-model_v4 51 487 37 395 0.5826 0.7171
AF-D4B2W4-F1-model_v4 38 475 8 308 0.5731 0.7284
AF-P43070-F1-model_v4 40 476 7 308 0.5663 0.7177
AF-P15703-F1-model_v4 40 476 12 313 0.5616 0.7165
AF-Q9LZV3-F1-model_v4 49 477 58 448 0.5387 0.6485
AF-P17974-F1-model_v4 16 360 26 426 0.4996 0.6571
AF-Q6NXH2-F1-model_v4 1 422 33 462 0.4986 0.5675
AF-Q5SRI9-F1-model_v4 1 421 30 459 0.4882 0.559
AF-Q5VSG8-F1-model_v4 1 423 16 457 0.4785 0.5421
AF-Q6P1J0-F1-model_v4 52 423 97 452 0.4743 0.6231
Download Full SwissProt Results