dbCAN Logo

PROTEIN: HRGMv2_0747_59_5

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0747_59_5.pdb
Genome ID:
HRGMv2_0747
Protein ID:
HRGMv2_0747_59_5

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKRILTVCIA   AALLMSMSAC   GGGGDNRENN   SVDSLVSQYG   YQWEDTSAPI   LNEQGAADLT 60
FNVYSSKNAS   ALDYNDMKIM   QDLYASTNVK   VNWENVSESV   YASQKNLIFG   NTKDRPDAIY 120
HAGMSAGEII   RYAERKVLLP   VSDYLEYMPN   FAKILEERPD   IKNQITNVSD   GKIYALPRIE 180
EMGLLQHPNL   LFLNKNWTAQ   AIKAGAVSGI   SEADLKDGLS   LTADQMEDIL   TYFKTNDMNG 240
NGSNDERPLN   FVYNNWQGNQ   CDLYGMFGIN   DNLEHRVVID   GTVTYTVLDD   RFKEATNYIS 300
GWVEDGLIDM   VSFEQSQDNF   LANGKGLEMY   GAFYWWESET   VVSNPENYIV   CEPLTGPHGD 360
QTICVSNNPE   VGTGELVIFA   DCPNVEVLLT   YFDRYYAPEV   SAQINYGAIG   VAFEEEKDAD 420
GMLVPKDPPA   GVTTDELRLQ   NAPLGIIYLS   DYAWENVVHM   EPRARLRKER   LEKYATPFVA 480
ENVTPVPNLQ   FTLEELNVLS   NYETNVNDYI   RTNLIKWLTQ   GGVSDSDWTS   FKSQLTGKIG 540
ITQIQKVYQD   AYDRYEAEQS   A 561
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 28 558 27 502 0.7012 0.7955
AF-A0A133D019-F1-model_v4 10 558 11 485 0.6484 0.7275
AF-Q2G1E9-F1-model_v4 11 547 15 417 0.5847 0.7099
AF-A0A133CSA1-F1-model_v4 36 543 21 427 0.5846 0.7084
AF-A0A0H3GX53-F1-model_v4 52 547 18 428 0.579 0.6972
AF-K0EMP7-F1-model_v4 24 548 26 440 0.5775 0.6998
AF-Q9CBN6-F1-model_v4 54 547 34 445 0.5758 0.7043
AF-A0A0H3GHK7-F1-model_v4 53 550 16 431 0.5758 0.6916
AF-K0F002-F1-model_v4 17 547 32 439 0.5755 0.7048
AF-P59214-F1-model_v4 33 550 33 423 0.5727 0.7147
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 558 32 506 0.6838 0.7808
A0A9Q8PNJ5 GH4 1 547 106 866 0.4575 0.5737
A0A242CSU4 CBM35 56 561 572 997 0.4311 0.7034
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 558 32 506 0.6838 0.7808
A0A9Q8PNJ5 GH4 1 547 106 866 0.4575 0.5737
A0A242CSU4 CBM35 56 561 572 997 0.4311 0.7034
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g5y-assembly1.cif.gz_A 53 560 1 494 0.8687 0.9319
6fth-assembly1.cif.gz_A 54 560 1 496 0.8207 0.8829
3omb-assembly1.cif.gz_A 30 557 1 503 0.8181 0.8746
5g62-assembly2.cif.gz_B 59 560 1 491 0.8038 0.8713
5xs8-assembly1.cif.gz_A 59 552 1 474 0.7457 0.8235
4tqu-assembly1.cif.gz_Q 47 560 2 492 0.7332 0.8006
5h6u-assembly1.cif.gz_A 47 557 1 487 0.7307 0.7994
3vlw-assembly2.cif.gz_B 47 557 1 489 0.729 0.7965
6jhx-assembly2.cif.gz_B 47 554 2 483 0.7227 0.7951
5suo-assembly1.cif.gz_A 56 557 1 451 0.6649 0.755
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 26 560 30 538 0.862 0.9366
AF-P37966-F1-model_v4 35 557 27 502 0.7148 0.8101
AF-Q795R2-F1-model_v4 13 557 7 498 0.699 0.7676
AF-Q8FVS7-F1-model_v4 54 547 19 411 0.607 0.7437
AF-Q578M8-F1-model_v4 54 547 19 411 0.606 0.7424
AF-Q2YKZ9-F1-model_v4 54 547 19 411 0.6052 0.7414
AF-O31518-F1-model_v4 37 544 26 427 0.5961 0.7283
AF-O07009-F1-model_v4 31 550 27 421 0.589 0.7267
AF-O06989-F1-model_v4 55 547 31 415 0.5816 0.7304
AF-Q7LYW7-F1-model_v4 37 546 33 450 0.5813 0.7038
Download Full SwissProt Results