PROTEIN: HRGMv2_0735_48_4
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Protein File & Metadata
Source:
HRGMv2_0735_48_4.pdb
Genome ID:
Protein ID:
HRGMv2_0735_48_4
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Protein Sequence
MTHRNSARSC WLWGAGITAL LWGFLLCFSD IYFAANDDQF ILRAMTGFQP GGTPDFHPFL 60 LGFYVYPLRW LQRFFPGVAW YSLLELLLLA LALTVILKSL LQCWLRAGRR LRTGLLLCAG 120 YAALYGSNYL ARVTFTVTGA MLGAAAVAQI LSIDCQSASD RSLLRAMTLA ILLLILCYGL 180 RQLSLVPVLG YCGIAFLLRF CSFFGFGKQT KRSARPMLVA AGLALLILGG LFAGRALEIR 240 LKQKQDALQW QQARSQVLDY INLKSLPSEA LESVGWTDEQ RILLDKWNTM DEAISTEALR 300 SVRKNWYNSE TTTTAGAAIE DLRWRSPWFV QTMVVLFGLG LFALFCAFRN RRENPWLPLA 360 LLMTGLLCFL FFCYLALKGR LPYRAVTVAL LPAAAMVFCL LGECPLPTAR KGWRAALGIL 420 LAVSMAAPLP ALLGAVRRRR SPWDYNAHAD MDAQALTHPD LLLIYSTELV NDMRMFPDTS 480 QGVPQNLTFW GGWSRGSEEY TAKLAAFGLD GEHFTAADWL RPELRFISLK EAPDEALLAY 540 LRSELGPVEW EAEKVSAGLY FFRFFQP 567
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 2 | 567 | 1 | 513 | 0.6574 |
0.714 |
| AF-K0F7B2-F1-model_v4 | 2 | 566 | 5 | 480 | 0.6457 |
0.7336 |
| AF-Q8CZ87-F1-model_v4 | 1 | 565 | 32 | 518 | 0.6344 |
0.7224 |
| AF-A0A0D2GSK3-F1-model_v4 | 1 | 565 | 25 | 596 | 0.6167 |
0.6545 |
| AF-Q54PM5-F1-model_v4 | 8 | 564 | 10 | 547 | 0.6115 |
0.6533 |
| AF-F1M7C0-F1-model_v4 | 1 | 567 | 12 | 547 | 0.6028 |
0.7154 |
| AF-Q8BMD6-F1-model_v4 | 1 | 567 | 12 | 547 | 0.6026 |
0.7153 |
| AF-Q5AK24-F1-model_v4 | 1 | 563 | 1 | 482 | 0.6014 |
0.6685 |
| AF-Q9NX78-F1-model_v4 | 1 | 567 | 16 | 551 | 0.6012 |
0.7151 |
| AF-K0EVV4-F1-model_v4 | 1 | 567 | 21 | 662 | 0.5987 |
0.6622 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D5EJZ3-F1-model_v4 | GT83 | 1 | 566 | 12 | 502 | 0.6648 |
0.7463 |
| AF-A0A1P8JUX7-F1-model_v4 | GT83 | 2 | 567 | 3 | 517 | 0.6561 |
0.7153 |
| UAB91770.1 | GT89 | 1 | 567 | 3 | 521 | 0.6555 |
0.7215 |
| AF-A0A6C2YNQ2-F1-model_v4 | GT83 | 1 | 567 | 18 | 504 | 0.6549 |
0.7358 |
| AF-A0A858ZSG0-F1-model_v4 | GT83 | 1 | 567 | 1 | 514 | 0.6545 |
0.7143 |
| AF-F4GBJ3-F1-model_v4 | GT83 | 1 | 567 | 1 | 514 | 0.6538 |
0.7136 |
| AF-A0A127JPD6-F1-model_v4 | GT83 | 1 | 566 | 1 | 507 | 0.6514 |
0.7186 |
| AF-A0A240UA42-F1-model_v4 | GT83 | 1 | 567 | 3 | 516 | 0.6509 |
0.7114 |
| AF-A0A2H5B4C4-F1-model_v4 | GT83 | 5 | 567 | 6 | 489 | 0.6488 |
0.7247 |
| AF-A0A6N0JRE1-F1-model_v4 | GT83 | 1 | 567 | 5 | 522 | 0.6474 |
0.7034 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A518B1Q4 | GT83 | 1 | 567 | 2 | 486 | 0.6688 |
0.7486 |
| D5EJZ3 | GT83 | 1 | 566 | 12 | 502 | 0.6648 |
0.7463 |
| I0H3R1 | GT83 | 1 | 567 | 4 | 484 | 0.6625 |
0.7393 |
| M4V8Z6 | GT83 | 2 | 566 | 1 | 478 | 0.6596 |
0.7385 |
| G2IXE2 | GT83 | 1 | 567 | 6 | 522 | 0.6576 |
0.7129 |
| UAB91770.1 | GT89 | 1 | 567 | 3 | 521 | 0.6555 |
0.7215 |
| A0A6C2YNQ2 | GT83 | 1 | 567 | 18 | 504 | 0.6549 |
0.7358 |
| A0A127JPD6 | GT83 | 1 | 566 | 1 | 507 | 0.6514 |
0.7186 |
| A0A0U3EJ09 | GT83 | 6 | 566 | 1 | 497 | 0.6513 |
0.7163 |
| UFS57809.1 | GT83 | 2 | 567 | 7 | 481 | 0.6498 |
0.7319 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MLH5-F1-model_v4 | 9 | 566 | 2 | 470 | 0.6514 |
0.734 |
| AF-Q1MJ96-F1-model_v4 | 9 | 564 | 7 | 493 | 0.6311 |
0.7064 |
| AF-Q1MJ94-F1-model_v4 | 9 | 564 | 7 | 491 | 0.6293 |
0.7057 |
| AF-O67601-F1-model_v4 | 9 | 565 | 1 | 416 | 0.6268 |
0.7389 |
| AF-Q4KC80-F1-model_v4 | 9 | 564 | 3 | 545 | 0.6264 |
0.665 |
| AF-Q7N3Q9-F1-model_v4 | 1 | 566 | 1 | 552 | 0.6226 |
0.6545 |
| AF-A4TIM6-F1-model_v4 | 9 | 565 | 5 | 551 | 0.6192 |
0.6562 |
| AF-B4ETL9-F1-model_v4 | 1 | 564 | 1 | 550 | 0.6189 |
0.6528 |
| AF-A1JPM4-F1-model_v4 | 6 | 565 | 4 | 551 | 0.6187 |
0.6547 |
| AF-Q57M54-F1-model_v4 | 9 | 565 | 3 | 545 | 0.6178 |
0.6556 |