PROTEIN: HRGMv2_0735_30_5
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Protein File & Metadata
Source:
HRGMv2_0735_30_5.pdb
Genome ID:
Protein ID:
HRGMv2_0735_30_5
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Protein Sequence
MKRFLSILLS VTLLMCSLAI PTALGEELPY YEMQVFSQNA NFAGLQSGWF GKLIKDRFNI 60 GLNIVATNLE GGSSKLATMM VDGDLGDLLN FDSVTSQDFL DARDLGLMYN MNEGDFLEKN 120 APFITANMPK LIERAKMQYS GDGESVWAFV HDALATDLPC ISTDCVTPLL RYDLYKAVGS 180 PEINTMWDYL PVLKQMQELY PTNEEGQPVY GVSYFPDWDS TNMVLATWFC MYYGYGPNLV 240 MQHGTKDLTM ELLDKESYYM QGVRWLYEAN QMGLLDPDSI TQSYSEFLSK CAAGRVLFSP 300 TGDNGYNTPE NTSVGRAMEP VPMKDGAPLG WGASEYGGYR SFGIGAKAKY PERVMQFIDW 360 LCTDEGAMES RIGPKGLIWD YNEEGKPYLT EFGLQCVQDG STPIPDEWGG GTYQDGMFKL 420 EYPPRNAKNM TASTGETIDY HSWSSYQALP ADPVTEEWRK DYGYANIFDW AYANGTLVNS 480 SNTTYSGLAN LESPDLDMQM KISQIGDAVK QYSWKMAYAE NDEQFDSLYN EMMEKVRGFG 540 YEEAMEFYRV QTEQLYETRD RLVGGAN 567
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 26 | 562 | 33 | 502 | 0.6563 |
0.758 |
| AF-A0A133D019-F1-model_v4 | 30 | 561 | 36 | 485 | 0.6233 |
0.7357 |
| AF-K0EWS5-F1-model_v4 | 28 | 550 | 24 | 456 | 0.5538 |
0.6593 |
| AF-A0A133CSA1-F1-model_v4 | 22 | 547 | 21 | 427 | 0.5466 |
0.6659 |
| AF-Q9CBN6-F1-model_v4 | 27 | 550 | 34 | 445 | 0.5411 |
0.6635 |
| AF-Q8DRJ6-F1-model_v4 | 28 | 565 | 59 | 514 | 0.5387 |
0.646 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 26 | 561 | 42 | 506 | 0.6264 |
0.7338 |
| A0A9Q8PNJ5 | GH4 | 28 | 551 | 468 | 866 | 0.418 |
0.6821 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 26 | 561 | 42 | 506 | 0.6264 |
0.7338 |
| A0A9Q8PNJ5 | GH4 | 28 | 551 | 468 | 866 | 0.418 |
0.6821 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3omb-assembly1.cif.gz_A | 26 | 561 | 3 | 503 | 0.723 |
0.786 |
| 5g5y-assembly1.cif.gz_A | 26 | 565 | 1 | 494 | 0.7209 |
0.7892 |
| 6fth-assembly1.cif.gz_A | 28 | 564 | 1 | 496 | 0.7184 |
0.7836 |
| 5xs8-assembly1.cif.gz_A | 30 | 558 | 1 | 474 | 0.7094 |
0.7901 |
| 5g62-assembly2.cif.gz_B | 31 | 565 | 1 | 491 | 0.699 |
0.769 |
| 4tqu-assembly1.cif.gz_Q | 21 | 565 | 2 | 492 | 0.6855 |
0.7551 |
| 5h6u-assembly1.cif.gz_A | 20 | 561 | 1 | 487 | 0.6839 |
0.7553 |
| 3vlw-assembly2.cif.gz_B | 20 | 561 | 1 | 489 | 0.6805 |
0.7508 |
| 6jhx-assembly2.cif.gz_B | 20 | 561 | 1 | 483 | 0.6779 |
0.7515 |
| 5suo-assembly1.cif.gz_A | 29 | 561 | 1 | 451 | 0.6516 |
0.7425 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 21 | 565 | 38 | 538 | 0.7009 |
0.7878 |
| AF-P37966-F1-model_v4 | 26 | 561 | 31 | 502 | 0.6581 |
0.7563 |
| AF-Q795R2-F1-model_v4 | 23 | 561 | 36 | 498 | 0.6499 |
0.7574 |
| AF-Q8FVS7-F1-model_v4 | 29 | 551 | 22 | 411 | 0.5677 |
0.702 |
| AF-Q578M8-F1-model_v4 | 29 | 551 | 22 | 411 | 0.5663 |
0.7005 |
| AF-Q2YKZ9-F1-model_v4 | 29 | 551 | 22 | 411 | 0.5657 |
0.6999 |
| AF-O31518-F1-model_v4 | 20 | 548 | 24 | 427 | 0.559 |
0.6834 |
| AF-Q55471-F1-model_v4 | 29 | 550 | 28 | 421 | 0.5322 |
0.6613 |
| AF-O58758-F1-model_v4 | 25 | 550 | 39 | 420 | 0.5299 |
0.6744 |
| AF-D4GP35-F1-model_v4 | 23 | 550 | 60 | 459 | 0.5274 |
0.6718 |