dbCAN Logo

PROTEIN: HRGMv2_0719_9_41

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0719_9_41.pdb
Genome ID:
HRGMv2_0719
Protein ID:
HRGMv2_0719_9_41

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKLNKAQVRV   IFLLDLVLIV   LIVAIGVQYA   LNGKFRVGGV   EPAASADVTV   TEPAPAPEYS 60
TERSARLSLS   DSIDLETNVG   GSGDERLTDV   IAVGDRVYVF   GNTESNDYDA   TSGNGAFVSV 120
LGTDLNTVAF   YRPSDRKIAG   VTLAEGGFLL   ALGDSGGVSL   ALMNYDGEVT   ATAPATDGEF 180
AALRLTDEGY   ALITGVTHSP   LSKKKLLLRA   YDFSLGLTLE   RMISSPYSLD   FVDVFKTGDT 240
YTVFFNATSD   LSRHAGAAIC   RLSADEPKIT   YVDKGGAYRA   AAVAPVQSGW   AMAAIYEGGD 300
GAVMLIDGDF   NKKTVVFQGA   SRPDSAVLDY   CDGAYYVGFF   GENPSVSLAY   DPTFTVRKSL 360
SVLGEFSKTT   DYVAGNGWGL   YAGECGDTLG   VVGSRGACSL   RFGSKNESNL   KLACSGNLFF 420
AAAESRGISA   DVGGSFGGID   IWVVRLRI 448
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-U7PJZ3-F1-model_v4 10 448 1 488 0.6459 0.7029
AF-A0A1D6J4G2-F1-model_v4 5 448 1 561 0.5919 0.6763
AF-A0A175W328-F1-model_v4 16 448 50 582 0.5917 0.7031
AF-A0A133CP22-F1-model_v4 91 416 2 340 0.5883 0.7109
AF-A0A175VV49-F1-model_v4 11 445 12 401 0.5711 0.6369
AF-O74845-F1-model_v4 7 448 86 560 0.5699 0.6546
AF-Q9JHB4-F1-model_v4 14 422 32 367 0.5609 0.6852
AF-U7PPD6-F1-model_v4 28 447 74 655 0.5524 0.7038
AF-O74910-F1-model_v4 2 448 27 620 0.5492 0.6569
AF-C0NH98-F1-model_v4 70 448 232 622 0.5468 0.7491
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A2D2D7D3-F1-model_v4 PL42 1 447 16 515 0.5688 0.6229
A0A8F9XKI5 PL0 76 448 1 413 0.5508 0.6485
AF-A0A0C5WNM8-F1-model_v4 PL25 66 440 21 455 0.5497 0.6699
AF-A0A1B2HED9-F1-model_v4 GH184 7 439 62 530 0.549 0.6282
AF-A0A3S5FI44-F1-model_v4 PL24 71 448 39 493 0.5397 0.6814
AF-D7FDR2-F1-model_v4 GH33 72 417 13 330 0.5297 0.6522
AF-A0A5Q3QBN1-F1-model_v4 GH184 52 440 31 524 0.5287 0.6604
AF-A0A1Q2QF99-F1-model_v4 GH33 72 417 23 340 0.5212 0.6504
AF-A0A1Q2RPL9-F1-model_v4 GH33 72 418 23 341 0.521 0.6479
AF-A0A1Q2RUC1-F1-model_v4 GH33 72 417 23 340 0.5209 0.6499
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2A4CCT8 PL42 60 448 31 470 0.6016 0.7173
A0A0Q8XDV6 PL42 71 448 17 422 0.6015 0.7037
BCS39880.1 PL22 60 448 39 372 0.5972 0.7402
SET71872.1 PL22 60 448 5 383 0.597 0.6731
A0A7W7JXU9 PL42 71 448 8 408 0.5728 0.6639
A0A2D2D7D3 PL42 1 447 16 515 0.5688 0.6229
A0A9Q8SWV3 PL42 69 448 3 455 0.5649 0.6808
A0A084GGB7 PL42 71 448 28 448 0.5628 0.6778
A0A0C5WNM8 PL25 66 440 21 455 0.5497 0.6699
A0A1B2HED9 GH184 7 439 62 530 0.549 0.6282
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7ohq-assembly1.cif.gz_x 71 447 30 413 0.6451 0.748
4o9d-assembly1.cif.gz_B 71 447 4 382 0.6378 0.7251
6fhx-assembly1.cif.gz_A 86 439 9 338 0.6096 0.7326
7z8b-assembly1.cif.gz_F 70 448 77 423 0.6059 0.7912
2b5n-assembly4.cif.gz_D 71 397 10 320 0.5879 0.7197
5y2z-assembly5.cif.gz_J 71 397 5 328 0.5858 0.7012
8dys-assembly1.cif.gz_A 57 448 9 408 0.5847 0.6602
6vyc-assembly1.cif.gz_A 71 448 5 331 0.5845 0.6985
3wj9-assembly2.cif.gz_B 57 446 11 398 0.5843 0.6604
8shj-assembly1.cif.gz_A 71 448 1 334 0.5787 0.681
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8BHJ5-F1-model_v4 12 448 2 514 0.5994 0.6705
AF-Q9BQ87-F1-model_v4 5 447 2 522 0.5981 0.6646
AF-O67134-F1-model_v4 72 414 1 312 0.5927 0.7478
AF-A0R316-F1-model_v4 60 448 24 341 0.5873 0.7518
AF-Q8CRT1-F1-model_v4 83 414 12 342 0.5828 0.6972
AF-P54498-F1-model_v4 71 434 38 353 0.5719 0.7235
AF-O74845-F1-model_v4 7 448 86 560 0.5699 0.6546
AF-Q9JHB4-F1-model_v4 14 422 32 367 0.5609 0.6852
AF-Q7NMB1-F1-model_v4 72 398 30 323 0.5562 0.7179
AF-O74910-F1-model_v4 2 448 27 620 0.5492 0.6569
Download Full SwissProt Results