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PROTEIN: HRGMv2_0713_12_39

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_0713_12_39.pdb
Genome ID:
HRGMv2_0713
Protein ID:
HRGMv2_0713_12_39

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKLVTVLLA   LAVSLSAVLG   LTACGRSENY   DPNNFLPNGT   AENPYQIVAE   PITIKIFVPK 60
SALNPSFKNL   KMFQKLEEMT   NLRFIFTEAD   TAAYSQLRSA   AWEDKKSLPD   LFLFNNPVSE 120
QVIYSQYGAV   VPFNDRDLVV   NGIEVGSLID   NYMPTYKKLL   DENFNIDSPY   SARKVATFSD 180
GMMYSTLCVN   DVPRDLTFKM   YINQQWIENL   REDDVEIPSN   VTSFKTAAEI   PDATDIKTVE 240
EYVDILRLFK   KYDVNRNGDP   NDEVPVSAKE   LEYLRNFILA   SYGYVYGGAE   QESDGSKMTY 300
VPSTEAYRKY   LQTMNIMFSE   GLLDKSTFSI   KTDAQLAQKG   LEHRLGSFCS   AAAYITVGYD 360
YEDEYEMFGP   LTSDYYTGDP   IQWGFANFSP   TGAVIPTGTS   KVREVARLLD   IMYSDIGCQL 420
IAYGEEGVDW   KWDNEDKTSW   TFLVPDDWTG   SQEDYRATIT   PNVGTASALY   WKYDFVGKMN 480
DDIITALNRM   SERYAPYLKQ   IVPDDLKMIE   EEYNKIETIN   ASLDVYLKNA   ECLFVMGDND 540
PFKDSDWNSF   QSDLKSYRSE   ELIRCYNDAF   ARNKK 575
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 26 575 25 502 0.7452 0.8471
AF-A0A133D019-F1-model_v4 28 575 34 484 0.6798 0.803
AF-K0EWS5-F1-model_v4 31 564 21 455 0.6342 0.7526
AF-A0A133CDW9-F1-model_v4 26 568 35 444 0.6258 0.7723
AF-Q7AQ51-F1-model_v4 27 566 32 445 0.6247 0.7643
AF-K0F002-F1-model_v4 17 565 34 439 0.6245 0.7738
AF-A0A0H3GHK7-F1-model_v4 34 572 18 433 0.6231 0.7541
AF-Q8DNU8-F1-model_v4 34 566 35 440 0.6205 0.7708
AF-A0A133CPC5-F1-model_v4 32 565 28 423 0.6182 0.7694
AF-K0F8J3-F1-model_v4 28 565 26 434 0.6145 0.7544
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 575 33 506 0.7266 0.8358
AF-K8EJG7-F1-model_v4 CBM50 , CE4 27 569 29 417 0.6018 0.7553
A0A9Q8PNJ5 GH4 1 565 226 866 0.4745 0.5849
AF-A0A1B0VLS2-F1-model_v4 CBM0 29 575 538 964 0.4411 0.7234
UJP10085.1 GH154 1 539 151 1171 0.3531 0.5306
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 575 33 506 0.7266 0.8358
K8EJG7 CBM50 , CE4 27 569 29 417 0.6018 0.7553
A0A9Q8PNJ5 GH4 1 565 226 866 0.4745 0.5849
UJP10085.1 GH154 1 539 151 1171 0.3531 0.5306
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3omb-assembly1.cif.gz_A 28 575 1 503 0.796 0.8609
6fth-assembly1.cif.gz_A 49 575 1 496 0.7958 0.866
5xs8-assembly1.cif.gz_A 51 570 1 474 0.7784 0.8659
4tqu-assembly1.cif.gz_Q 42 575 1 488 0.7661 0.8464
6jhx-assembly2.cif.gz_B 42 575 1 483 0.7629 0.8434
5h6u-assembly1.cif.gz_A 45 575 1 485 0.7629 0.8436
5g62-assembly2.cif.gz_B 52 575 1 489 0.7618 0.8387
3vlw-assembly2.cif.gz_B 43 575 1 487 0.7592 0.8386
5g5y-assembly1.cif.gz_A 48 575 1 491 0.757 0.8336
5suo-assembly1.cif.gz_A 51 575 1 449 0.7049 0.8068
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 25 575 28 535 0.7615 0.8457
AF-P37966-F1-model_v4 30 574 28 502 0.7508 0.8572
AF-Q795R2-F1-model_v4 30 575 30 498 0.7261 0.8376
AF-Q8FVS7-F1-model_v4 33 565 20 411 0.656 0.8105
AF-Q578M8-F1-model_v4 33 565 20 411 0.6552 0.8098
AF-Q2YKZ9-F1-model_v4 33 565 20 411 0.6551 0.8098
AF-O50499-F1-model_v4 1 574 3 469 0.6272 0.7121
AF-O32156-F1-model_v4 22 568 19 422 0.6246 0.7626
AF-Q7LYW7-F1-model_v4 39 568 36 450 0.6194 0.7605
AF-A0QXD9-F1-model_v4 12 565 38 477 0.6169 0.7411
Download Full SwissProt Results