PROTEIN: HRGMv2_0707_1_555
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0707_1_555.pdb
Genome ID:
Protein ID:
HRGMv2_0707_1_555
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MIDLRGRLPV AIYCPPNPRL EMNGKIYESA INAEQFDRIR DLGVNIVLGP GEGFGTPQAE 60 ENIVAMRLCA GRDMYFLPRD ELAREYVSAK WNGLTCAEKT ALDARFENSL RGYCEEPGFG 120 GLLFWDEPGA TGFPGIAAAK RVFARVCPGK LFYVNMYGHC ITPEQFQGEG EPEPCFCEEP 180 KEKRYSNFMS RYLREVEPEI YSYDLYPMVS LGGIATTVHR ALYDLPLLAK SNLRASGRNI 240 PLWCFLQAGG RWEGSLGVRV PVQSEVLLQV NALLALGVAG LEIFPYYFPA CWEPDREVVA 300 GLVDVRGNPT ALYHHYRRAL ASAIACQEVF TGYAYKGFFL SGKFNGLLPP EETLKTVLWE 360 DCIYRGGIES EENIGCFPPI LRTESTSEAL VGCFEGEYPA VWVVNNSIAA AANVALFLDA 420 PRETEIVREG VRTREVLREV RLDALEAGAA ALVVFKEKRE QRD 463
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132ZAQ4-F1-model_v4 | 4 | 463 | 15 | 505 | 0.6164 |
0.6647 |
| AF-Q7K127-F1-model_v4 | 1 | 457 | 26 | 417 | 0.607 |
0.6944 |
| AF-Q9I1N2-F1-model_v4 | 4 | 455 | 41 | 442 | 0.6027 |
0.6929 |
| AF-A0A0H3GP41-F1-model_v4 | 1 | 457 | 7 | 685 | 0.599 |
0.7311 |
| AF-A0A175W6H1-F1-model_v4 | 1 | 457 | 23 | 402 | 0.5943 |
0.6877 |
| AF-A0A077Z7X2-F1-model_v4 | 1 | 463 | 13 | 581 | 0.5748 |
0.6632 |
| AF-A0A175VZB8-F1-model_v4 | 1 | 459 | 184 | 564 | 0.5725 |
0.7636 |
| AF-A0A5S6PIC2-F1-model_v4 | 1 | 456 | 127 | 645 | 0.5572 |
0.6675 |
| AF-U7Q0B0-F1-model_v4 | 1 | 457 | 217 | 646 | 0.5461 |
0.6885 |
| AF-A0A175W202-F1-model_v4 | 4 | 463 | 36 | 369 | 0.5237 |
0.6971 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K6AWF3 | GH111 | 1 | 456 | 50 | 503 | 0.699 |
0.7563 |
| AF-B0C6E2-F1-model_v4 | GH111 | 1 | 459 | 35 | 495 | 0.6965 |
0.7543 |
| AF-A0A2Z3HHM8-F1-model_v4 | GH140 | 1 | 459 | 1 | 430 | 0.6647 |
0.7146 |
| AF-A0A1G6TUH9-F1-model_v4 | CBM66 | 1 | 459 | 45 | 623 | 0.6629 |
0.7738 |
| AF-A0A344TS55-F1-model_v4 | GH140 | 1 | 458 | 8 | 423 | 0.6627 |
0.7313 |
| AF-A0A3S9A294-F1-model_v4 | GH140 | 1 | 458 | 6 | 433 | 0.6614 |
0.7096 |
| AF-C5C1Z0-F1-model_v4 | CBM66 | 1 | 459 | 46 | 626 | 0.6605 |
0.7726 |
| AF-A0A1H1MJK6-F1-model_v4 | CBM66 | 1 | 462 | 68 | 661 | 0.6574 |
0.7807 |
| AF-A0A2K9P1H9-F1-model_v4 | GH140 | 1 | 455 | 1 | 433 | 0.6571 |
0.6983 |
| AF-A0A7G5LS84-F1-model_v4 | CBM66 | 1 | 457 | 69 | 642 | 0.6509 |
0.7721 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K6AWF3 | GH111 | 1 | 456 | 50 | 503 | 0.699 |
0.7563 |
| B0C6E2 | GH111 | 1 | 459 | 35 | 495 | 0.6965 |
0.7543 |
| E8N5S0 | GH140 | 1 | 459 | 3 | 445 | 0.6658 |
0.7099 |
| BCM92468.1 | GH140 | 1 | 457 | 7 | 435 | 0.6616 |
0.711 |
| UTE73286.1 | GH140 | 1 | 461 | 12 | 447 | 0.6596 |
0.7063 |
| A0A1H1MJK6 | CBM66 | 1 | 462 | 68 | 661 | 0.6574 |
0.7807 |
| A0A2K9P1H9 | GH140 | 1 | 455 | 1 | 433 | 0.6571 |
0.6983 |
| A0A5C5XYQ2 | GH140 | 1 | 461 | 29 | 458 | 0.6551 |
0.7175 |
| A0A7G8UY61 | GH140 | 1 | 459 | 7 | 440 | 0.6547 |
0.7071 |
| A0A7G5LS84 | CBM66 | 1 | 457 | 69 | 642 | 0.6509 |
0.7721 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5msy-assembly3.cif.gz_C | 1 | 459 | 10 | 442 | 0.6525 |
0.7072 |
| 4qfu-assembly3.cif.gz_C | 1 | 459 | 10 | 441 | 0.6504 |
0.7106 |
| 4qfu-assembly4.cif.gz_D | 1 | 459 | 11 | 439 | 0.6502 |
0.7142 |
| 4qfu-assembly8.cif.gz_H | 1 | 459 | 10 | 442 | 0.6494 |
0.7094 |
| 4qfu-assembly12.cif.gz_L | 1 | 459 | 10 | 445 | 0.6485 |
0.7054 |
| 4qfu-assembly6.cif.gz_F | 1 | 459 | 15 | 447 | 0.6472 |
0.7095 |
| 1ktb-assembly1.cif.gz_A | 1 | 458 | 3 | 388 | 0.6399 |
0.7183 |
| 3igu-assembly1.cif.gz_B | 1 | 458 | 3 | 387 | 0.6397 |
0.7192 |
| 4zn2-assembly3.cif.gz_C | 4 | 455 | 12 | 413 | 0.6184 |
0.6919 |
| 2c7f-assembly4.cif.gz_D | 4 | 456 | 13 | 499 | 0.61 |
0.6629 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9KBR4-F1-model_v4 | 4 | 456 | 17 | 499 | 0.6068 |
0.661 |
| AF-P14899-F1-model_v4 | 1 | 455 | 27 | 499 | 0.5931 |
0.6428 |
| AF-D5JGG0-F1-model_v4 | 1 | 459 | 1 | 665 | 0.5924 |
0.7119 |
| AF-O31529-F1-model_v4 | 4 | 459 | 1 | 663 | 0.5829 |
0.704 |
| AF-Q65KX8-F1-model_v4 | 3 | 460 | 1 | 663 | 0.5809 |
0.6986 |
| AF-P21332-F1-model_v4 | 1 | 456 | 2 | 558 | 0.5691 |
0.6451 |
| AF-A1CBW8-F1-model_v4 | 1 | 460 | 21 | 405 | 0.545 |
0.6987 |
| AF-Q4WVZ3-F1-model_v4 | 1 | 461 | 25 | 411 | 0.5426 |
0.6956 |
| AF-A2QL72-F1-model_v4 | 1 | 460 | 27 | 413 | 0.5422 |
0.6978 |
| AF-A1DDD8-F1-model_v4 | 1 | 461 | 25 | 411 | 0.541 |
0.6942 |