PROTEIN: HRGMv2_0697_58_5
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Protein File & Metadata
Source:
HRGMv2_0697_58_5.pdb
Genome ID:
Protein ID:
HRGMv2_0697_58_5
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Protein Sequence
MKKKILGALM ACSMLFAASC GGGSGSVGSS GGQGKTLNPE DYVSTEKFIT IADVPPHPVN 60 ELEDYVNLGF SGYILTEDHV KFTENRQITN GYKAALESLK NKGLDVYIRN QYNDPDYFVN 120 SDTSPRTQFN AGGTSDPYVI PERNITTEFK DYPQVKGFYM SDEPDYNKLS QYGKIIDWYN 180 TYYSDTYFHM NLLPSYANQQ NFAGYGYSGY VKQFVSEIVE KVKGKKSICL DNYPFTLEQQ 240 GSVRSSYLSD ILLIANTAKA YNDAVAEADK AYMGICIQTF KSSTLADITC PAQVSFQLLT 300 GMAVGSKMYE YFLYGSGMGM YGIMTNGEKR IYDHVKTAND KYLGFEKVLN SFDWQGLTTI 360 SAENASDSEN AETFETISDI TLKNTGVLSL NKSSSRLDMI VGAFKKGETD GYLAVNYSYP 420 VAGKTNTAKL YFENCSSALV YTGTEEGMKV EKVKLVDGIL RLNLGAGEGA FVIPA 475
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A286REU7-F1-model_v4 | GH39 | 24 | 473 | 16 | 429 | 0.6029 |
0.6754 |
| AF-A0A7G9P1M8-F1-model_v4 | GH39 | 42 | 473 | 25 | 421 | 0.5951 |
0.6846 |
| AF-B9M9D4-F1-model_v4 | GH39 | 2 | 475 | 26 | 460 | 0.5934 |
0.6584 |
| AF-A0A0M4FSD5-F1-model_v4 | GH39 | 1 | 474 | 33 | 438 | 0.59 |
0.6767 |
| A0A2H6B812 | GH0 | 39 | 475 | 5 | 400 | 0.589 |
0.6657 |
| AF-A0A4P8KZX4-F1-model_v4 | GH39 | 43 | 475 | 37 | 439 | 0.5885 |
0.6884 |
| AF-A0A410FSM0-F1-model_v4 | GH0 | 45 | 475 | 30 | 417 | 0.5874 |
0.695 |
| AF-A0A7G8BKJ4-F1-model_v4 | GH39 | 41 | 472 | 44 | 420 | 0.5847 |
0.7019 |
| AF-A0A806KBT0-F1-model_v4 | GH39 | 2 | 474 | 15 | 418 | 0.5827 |
0.6608 |
| AF-A0A3G9A2E8-F1-model_v4 | GH39 | 25 | 452 | 21 | 362 | 0.5777 |
0.7044 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K6AWF3 | GH111 | 44 | 475 | 56 | 503 | 0.6685 |
0.7656 |
| A0A7G9NXK2 | GH39 | 43 | 474 | 49 | 469 | 0.6052 |
0.6963 |
| A0A7G9P1M8 | GH39 | 42 | 473 | 25 | 421 | 0.5951 |
0.6846 |
| UGB41918.1 | GH39 | 41 | 475 | 35 | 415 | 0.5944 |
0.7038 |
| B9M9D4 | GH39 | 2 | 475 | 26 | 460 | 0.5934 |
0.6584 |
| A0A402CSM4 | GH39 | 13 | 473 | 17 | 418 | 0.5921 |
0.6758 |
| A0A0M4FSD5 | GH39 | 1 | 474 | 33 | 438 | 0.59 |
0.6767 |
| A0A4P8KZX4 | GH39 | 43 | 475 | 37 | 439 | 0.5885 |
0.6884 |
| A0A7G8BKJ4 | GH39 | 41 | 472 | 44 | 420 | 0.5847 |
0.7019 |
| A0A806KBT0 | GH39 | 2 | 474 | 15 | 418 | 0.5827 |
0.6608 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3tv8-assembly1.cif.gz_A | 44 | 475 | 6 | 389 | 0.5983 |
0.6848 |
| 4fmv-assembly1.cif.gz_A | 37 | 475 | 7 | 386 | 0.5969 |
0.6866 |
| 3kl3-assembly1.cif.gz_A | 37 | 474 | 8 | 389 | 0.5814 |
0.669 |
| 6tbj-assembly8.cif.gz_H | 13 | 475 | 10 | 516 | 0.5717 |
0.6308 |
| 6tbj-assembly3.cif.gz_C | 14 | 475 | 10 | 518 | 0.5712 |
0.632 |
| 6tbk-assembly7.cif.gz_G | 13 | 475 | 11 | 520 | 0.5706 |
0.6312 |
| 6tbj-assembly2.cif.gz_B | 13 | 475 | 10 | 518 | 0.5703 |
0.6299 |
| 5jaw-assembly2.cif.gz_B | 13 | 475 | 10 | 521 | 0.5698 |
0.6302 |
| 5jaw-assembly2.cif.gz_G-3 | 13 | 475 | 10 | 524 | 0.5696 |
0.6322 |
| 5jaw-assembly1.cif.gz_E | 14 | 475 | 10 | 526 | 0.5683 |
0.6328 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.