dbCAN Logo

PROTEIN: HRGMv2_0697_1_8

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0697_1_8.pdb
Genome ID:
HRGMv2_0697
Protein ID:
HRGMv2_0697_1_8

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MSKKFTALLL   VFAILFLFSA   CVSGGDTSVK   NDSSNSSASV   ESGDTPEDAN   FLRGISEPYA 60
TSTVQGFNYE   IASDLIGALG   VESFRMWMSL   GTLYDGYKNG   VVLSDEKLSE   ISASGKAIYG 120
SYIESLKNVG   VREIIGSACF   LPKVPSTAKY   NSDKPYVPER   NPDADSDYAM   FLNKVYLIFK 180
AVAEAFPEIT   IWEMGNEYNS   NTFMTSPDRE   LTQQELADIC   VDYMYYATKG   VKEGNPDAIT 240
IPAGFAPVGG   IYAVQSFYEL   IYDAIDSGNY   PALGQKSTDY   RDYFAGLCWH   PYDGDNSVTL 300
TGDGSGLDLD   LWKKRNDDVY   NVAVSHGDTG   LKVWFTEFGY   TLSGGNMIRT   TAEDKSVTRY 360
NITGDYYDLN   PAAEEWTCNY   SNLYFEKMKE   MPYLHTLSYF   RLFCSVKGAE   WNGFGEVYFG 420
LFLEPDQTVN   RGFYPRKNAY   TIQKLFGGSG   DLMKYSTFAS   L 461
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0P0VCS5-F1-model_v4 7 448 2 347 0.6125 0.7148
AF-K7MY78-F1-model_v4 29 447 30 358 0.5951 0.7361
AF-C0PD14-F1-model_v4 31 456 27 380 0.5764 0.7186
AF-A0A0H3GTD0-F1-model_v4 45 450 37 429 0.5683 0.6538
AF-I1MU75-F1-model_v4 46 456 51 385 0.5621 0.7369
AF-F1R042-F1-model_v4 43 461 91 471 0.5466 0.6745
AF-C1H2T1-F1-model_v4 7 439 37 421 0.5038 0.584
AF-P53334-F1-model_v4 50 436 131 386 0.5021 0.8101
AF-A0A0H5SHS1-F1-model_v4 9 461 13 531 0.5002 0.5766
AF-A0A1D8PNW1-F1-model_v4 8 444 44 506 0.4671 0.5234
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A975MHE2 GH39 11 447 4 368 0.7021 0.7973
AF-A0A6H0SCC7-F1-model_v4 GH39 49 448 32 346 0.6978 0.8815
AF-A0A172URG2-F1-model_v4 GH39 49 448 36 350 0.6932 0.881
AF-A0A7I7T4G7-F1-model_v4 GH39 48 448 32 351 0.6914 0.8671
AF-A0A7G7MQG1-F1-model_v4 GH39 47 448 45 359 0.6825 0.8831
WEM94139.1 GH39 36 446 33 364 0.6822 0.8425
AF-A0A7H0HQV9-F1-model_v4 GH39 45 448 30 372 0.6815 0.8278
AF-A0A0P0YTB3-F1-model_v4 GH39 45 448 46 357 0.6811 0.8819
AF-A0A3G9A2E8-F1-model_v4 GH39 44 448 36 356 0.6797 0.8622
AF-A0A097QWN4-F1-model_v4 GH39 48 448 48 369 0.6786 0.8718
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A193SEN2 GH39 44 448 22 332 0.7178 0.8983
L0IUT5 GH39 31 447 10 333 0.7144 0.8613
A0A975MHE2 GH39 11 447 4 368 0.7021 0.7973
A0A0A8JBJ0 GH39 45 448 16 336 0.7017 0.8586
QRY61670.1 GH39 31 449 20 338 0.6956 0.8583
A0A2Z2MW09 GH39 5 448 25 369 0.6951 0.8368
A0A1A9GPC9 GH39 7 450 34 385 0.6935 0.8339
A0A1C3SZV1 GH39 32 447 18 340 0.6919 0.8493
E4U5R1 GH39 29 449 20 377 0.691 0.809
A0A0D5ADU3 GH39 49 445 31 344 0.6903 0.8715
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6mq4-assembly1.cif.gz_A 44 447 8 347 0.6633 0.7873
6z1h-assembly1.cif.gz_A 47 449 5 379 0.6593 0.7465
1ug6-assembly1.cif.gz_A 47 448 1 425 0.6561 0.7346
3zjk-assembly2.cif.gz_B 48 448 1 423 0.6561 0.7336
1np2-assembly2.cif.gz_B 47 448 1 424 0.6547 0.7328
4bce-assembly3.cif.gz_C 48 448 1 423 0.654 0.7323
1od0-assembly1.cif.gz_A 47 449 5 432 0.6516 0.735
5ns6-assembly1.cif.gz_C 44 448 3 437 0.6509 0.7334
2jal-assembly1.cif.gz_A 47 449 5 433 0.6506 0.7348
2j79-assembly1.cif.gz_A 47 449 5 434 0.6503 0.7351
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P15737-F1-model_v4 28 446 15 334 0.6008 0.7364
AF-Q00012-F1-model_v4 42 448 30 371 0.5936 0.7272
AF-A2QKT4-F1-model_v4 42 448 36 379 0.588 0.7219
AF-Q5B7X2-F1-model_v4 42 448 43 377 0.5876 0.7384
AF-P64426-F1-model_v4 42 448 47 439 0.5641 0.655
AF-A1C8U0-F1-model_v4 42 448 93 434 0.5526 0.7236
AF-Q5AR04-F1-model_v4 1 448 15 428 0.5519 0.6086
AF-Q4WBS1-F1-model_v4 42 448 95 437 0.5505 0.7219
AF-B0Y9E7-F1-model_v4 42 448 95 437 0.5496 0.7202
AF-Q2U2I3-F1-model_v4 3 448 37 459 0.549 0.6102
Download Full SwissProt Results