PROTEIN: HRGMv2_0696_4_25
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Protein File & Metadata
Source:
HRGMv2_0696_4_25.pdb
Genome ID:
Protein ID:
HRGMv2_0696_4_25
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Protein Sequence
MYYAMLIGAS FLFGSQFMVT KAFEKNYGKT VRASLSFSLL YSLFAGVIFF IIKLISSGTV 60 FNLNSFSLCM AFGLSLVNIL SSAIGIKTLA LGDIAVYSLF LMLGGMIVPF FAGIVFLKES 120 VSVCNLIGVA IMIIALCLPV FFGKKNKNAG EAQTDGDTKK KTSVFFYVLC VFLFILNGLS 180 STLSKFNSVR EGAALGAEFT FYTYGIQFVI SLAAFALTTA SGKSDKTQNE EKQPGILFRP 240 VAIGCGAAFG AVNGTAFLMS SVAAEHVVAV AQYPLITGAT ILFSSLLAFL FYREKPTALQ 300 LVQIVISLAA TILFMF 316
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DPI5-F1-model_v4 | 1 | 316 | 9 | 296 | 0.8352 |
0.9033 |
| AF-A0A0H3GYZ7-F1-model_v4 | 1 | 316 | 4 | 277 | 0.8112 |
0.893 |
| AF-Q5F951-F1-model_v4 | 3 | 316 | 1 | 282 | 0.8069 |
0.8848 |
| AF-P39314-F1-model_v4 | 1 | 316 | 3 | 307 | 0.8053 |
0.8618 |
| AF-Q328I8-F1-model_v4 | 1 | 316 | 6 | 310 | 0.804 |
0.8636 |
| AF-Q8ZL13-F1-model_v4 | 1 | 316 | 13 | 286 | 0.8026 |
0.8966 |
| AF-A0A0H3GXI1-F1-model_v4 | 1 | 316 | 6 | 281 | 0.8021 |
0.8866 |
| AF-Q8ZK75-F1-model_v4 | 1 | 316 | 3 | 308 | 0.8021 |
0.856 |
| AF-A0A0H3GLI9-F1-model_v4 | 1 | 316 | 3 | 307 | 0.7984 |
0.8577 |
| AF-K0F3J5-F1-model_v4 | 1 | 316 | 15 | 291 | 0.7964 |
0.8927 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 316 | 376 | 665 | 0.5668 |
0.8468 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 316 | 450 | 766 | 0.5294 |
0.763 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 316 | 820 | 1110 | 0.4855 |
0.8222 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 316 | 93 | 392 | 0.4729 |
0.7489 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 316 | 376 | 665 | 0.5668 |
0.8468 |
| A0A3P6AF83 | GH28 | 1 | 316 | 450 | 766 | 0.5294 |
0.763 |
| A0A7H8KSK8 | GT51 | 1 | 316 | 820 | 1110 | 0.4855 |
0.8222 |
| A0A4D6KI88 | GH1 | 1 | 316 | 93 | 392 | 0.4729 |
0.7489 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7paf-assembly1.cif.gz_D | 2 | 315 | 1 | 278 | 0.8468 |
0.9167 |
| 5i20-assembly4.cif.gz_D | 1 | 316 | 4 | 280 | 0.7896 |
0.8677 |
| 5i20-assembly3.cif.gz_C | 1 | 316 | 4 | 279 | 0.7867 |
0.8691 |
| 5i20-assembly2.cif.gz_B | 1 | 316 | 4 | 277 | 0.7862 |
0.8699 |
| 5i20-assembly1.cif.gz_A | 1 | 316 | 4 | 282 | 0.7826 |
0.8642 |
| 5i20-assembly5.cif.gz_E | 1 | 316 | 4 | 284 | 0.7786 |
0.8594 |
| 7b0k-assembly1.cif.gz_A | 2 | 316 | 1 | 255 | 0.7786 |
0.8814 |
| 5ogk-assembly1.cif.gz_B | 1 | 316 | 2 | 289 | 0.7654 |
0.8386 |
| 5oge-assembly4.cif.gz_F | 1 | 316 | 5 | 297 | 0.7649 |
0.8356 |
| 5oge-assembly1.cif.gz_E | 1 | 316 | 5 | 296 | 0.7621 |
0.834 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O34416-F1-model_v4 | 1 | 316 | 3 | 286 | 0.8068 |
0.8801 |
| AF-P39314-F1-model_v4 | 1 | 316 | 3 | 307 | 0.8053 |
0.8618 |
| AF-P44170-F1-model_v4 | 3 | 316 | 1 | 286 | 0.7929 |
0.86 |
| AF-Q08794-F1-model_v4 | 1 | 316 | 8 | 297 | 0.7911 |
0.8737 |
| AF-Q4UNE6-F1-model_v4 | 1 | 316 | 10 | 282 | 0.7868 |
0.8941 |
| AF-A6WUW2-F1-model_v4 | 6 | 316 | 1 | 276 | 0.7852 |
0.8713 |
| AF-P14182-F1-model_v4 | 1 | 316 | 1 | 286 | 0.782 |
0.8541 |
| AF-O29740-F1-model_v4 | 1 | 316 | 1 | 285 | 0.7794 |
0.8494 |
| AF-P71356-F1-model_v4 | 1 | 316 | 3 | 298 | 0.7788 |
0.8372 |
| AF-F4I8W6-F1-model_v4 | 1 | 316 | 15 | 329 | 0.7782 |
0.8262 |