dbCAN Logo

PROTEIN: HRGMv2_0688_2_176

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0688_2_176.pdb
Genome ID:
HRGMv2_0688
Protein ID:
HRGMv2_0688_2_176

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MMNNKEKKLH   EDNIEDSESR   ESVTKERDEV   SEKKSEVIEH   GVILALSLVL   LIVGACLKND 60
TAKRWLYTLS   FVITGYEVLY   STIVKLSKKA   VVIEEIAVIL   SSLILLYLGY   GGYSCLIVIF 120
FSLPIFGQKI   LQYIVLAKSE   SLGVAASYES   DEKAKSALKL   RAETLKFSLE   NSPAGKLFGK 180
KFKFIFNIVG   ICVGLIVAFI   SPIFGASDYL   YSLQNKWLIC   GTIVVALWQA   GVCAVNITGC 240
YIEAFYAADR   RGVLFGSFDA   IDNMAAKSTI   AFDCAGVVTE   NEININKVSG   VNPGEILSFA 300
YAAENGIDEY   FCSAISIYAK   RANITLSDIA   PDNITHTSCG   VSYVFNDKKY   AVGNKKFVKD 360
TVGISVDSSE   SESIVYVATE   DGEIGEISYN   RINKVNVTGE   IKEISEDLGI   ETVLLSGDGM 420
NAVQSLQAKL   GFNRAIAGAT   PEYKAEYVKN   NNAVYAGDFE   GDRETIETLN   GNCITIGGNK 480
IYENGATADG   DDVRQIPIML   KIAKRTRKKN   KFITALYFTI   KSVALIAGIT   LFALTGRFLW 540
VPVVICFIAD   LISSGLSVLN   VVEPS 565
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q0P9A1-F1-model_v4 23 565 145 785 0.6768 0.8246
AF-P9WPT7-F1-model_v4 30 565 21 650 0.6617 0.7621
AF-K0F1E9-F1-model_v4 35 565 1 642 0.6524 0.7563
AF-A0A132P2D8-F1-model_v4 34 565 1 619 0.6489 0.7436
AF-P9WPT5-F1-model_v4 13 565 35 715 0.6474 0.7522
AF-Q9CCL1-F1-model_v4 16 565 48 723 0.6471 0.7578
AF-A0A132Z382-F1-model_v4 29 565 20 643 0.6458 0.7345
AF-P9WPT3-F1-model_v4 33 565 30 648 0.6452 0.7445
AF-A0A0R0JZ81-F1-model_v4 14 565 5 705 0.6445 0.7552
AF-O26033-F1-model_v4 14 565 71 788 0.6362 0.7659
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A3F3AZX4 GT51 13 565 73 856 0.582 0.721
AF-A0A4P7C2S8-F1-model_v4 CBM50 25 565 49 705 0.5489 0.7097
AF-K8E1K6-F1-model_v4 GH1 1 565 9 858 0.5025 0.6279
AF-A0A4P7BYI3-F1-model_v4 CBM50 1 565 15 834 0.4734 0.6246
A0A9Q8WNH4 GH128 1 565 552 1496 0.4644 0.6832
AF-A0A4P7BYU0-F1-model_v4 CBM50 1 565 28 837 0.4633 0.612
A0A9Q8T8N0 AA9 , CBM1 1 565 82 1016 0.4536 0.6816
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A3F3AZX4 GT51 13 565 73 856 0.582 0.721
A0A4P7C2S8 CBM50 25 565 49 705 0.5489 0.7097
K8E1K6 GH1 1 565 9 858 0.5025 0.6279
A0A9Q8WNH4 GH128 1 565 552 1496 0.4644 0.6832
A0A4P7BYU0 CBM50 1 565 28 837 0.4633 0.612
A0A9Q8T8N0 AA9 , CBM1 1 565 82 1016 0.4536 0.6816
QWU86368.1 GT2 6 564 146 3318 0.3751 0.6531
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7r0i-assembly1.cif.gz_A 28 565 1 647 0.7212 0.8229
7xun-assembly1.cif.gz_A 26 565 1 713 0.6758 0.8107
7xuo-assembly1.cif.gz_A 24 565 71 788 0.6521 0.8084
7nnl-assembly1.cif.gz_B 35 561 13 639 0.6374 0.7555
7zrk-assembly1.cif.gz_B 34 561 6 632 0.6341 0.7474
7zrm-assembly1.cif.gz_B 33 561 8 632 0.6337 0.7461
7yaj-assembly1.cif.gz_A 1 564 11 813 0.5932 0.7276
7yah-assembly1.cif.gz_A 1 564 14 815 0.5907 0.7252
4umw-assembly1.cif.gz_A 29 565 1 603 0.5863 0.6516
7zrg-assembly1.cif.gz_B 30 565 3 632 0.5862 0.6834
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O31688-F1-model_v4 18 565 10 637 0.6744 0.7495
AF-P9WPT7-F1-model_v4 30 565 21 650 0.6617 0.7621
AF-O33533-F1-model_v4 17 565 39 742 0.6551 0.7815
AF-A0R3A7-F1-model_v4 34 565 24 638 0.6485 0.7454
AF-P9WPT5-F1-model_v4 13 565 35 715 0.6474 0.7522
AF-Q9CCL1-F1-model_v4 16 565 48 723 0.6471 0.7578
AF-P63686-F1-model_v4 33 565 30 648 0.6468 0.7461
AF-P0A503-F1-model_v4 14 565 33 715 0.6453 0.751
AF-P9WPT3-F1-model_v4 33 565 30 648 0.6452 0.7445
AF-P9WPT2-F1-model_v4 33 565 30 648 0.6424 0.7416
Download Full SwissProt Results