dbCAN Logo

PROTEIN: HRGMv2_0685_6_15

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0685_6_15.pdb
Genome ID:
HRGMv2_0685
Protein ID:
HRGMv2_0685_6_15

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MRKIFTKTTI   QKGAAAMLAG   LCVFSAAACG   KSGDTPAGFS   RVTFAYGVDG   DELKSEMKKL 60
VQAFNDSATA   QENKIFVKTN   AKSADGFDGF   LSTELVSRRG   ADVVTLEDEY   FRPLTNNLEP 120
LGATAEANVS   KLYEGVESRL   VYNTATGLSD   SEAKRYALPL   YNNTVVTYVN   VSKLKEAGVK 180
YISVDDSDEA   IAAFNAGGKD   NNGNTKADLG   ITGTVLRKGF   QRDNPYYGSA   WSAPSSGETL 240
IFNDKIAMNW   DETEDLGRIM   TKERNAASPT   DYGFYTEWWF   SYAWSVGGDC   IADITGNLDY 300
KFSLPDDTAN   YIVTAEDGFT   GETTGRKYAK   GDTLEFLDKI   HVGAGESVQA   ESDGRFTVNG 360
KTASVADNVK   AGLQSGALSA   LPSTKAAFTR   FAKMAAKEYG   DTRISPYPTE   VSANTNTSTY 420
FISGKLAMMI   ERVSNLDTVK   NLMNQSSQEW   TIAPVPAYKE   YENPRNGKSD   EVKVRGKQAN 480
HSHLLSVAIR   KNSEMKEQSE   IFLNWLVTEG   QKLLAEDGYG   SVNSDYENEV   LAAFNRTNNA 540
SVLLNSNKNS   KKGDWAYLTD   RIWIDVWAIP   LNSNVRNGSM   TLKDWFTGYV   TETNNSLADY 600
RK 602
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F8J3-F1-model_v4 34 601 25 436 0.6958 0.8592
AF-A0A133CPC5-F1-model_v4 36 599 32 423 0.6829 0.87
AF-Q8DNN7-F1-model_v4 30 602 27 436 0.6817 0.8474
AF-O53485-F1-model_v4 32 600 28 439 0.6792 0.8423
AF-Q7AQ51-F1-model_v4 39 602 34 444 0.6775 0.848
AF-A0A133CDW9-F1-model_v4 34 602 39 444 0.6753 0.8544
AF-Q9CBN6-F1-model_v4 36 600 35 446 0.6667 0.8341
AF-K0F002-F1-model_v4 38 599 46 439 0.6656 0.8608
AF-P76042-F1-model_v4 37 600 26 430 0.6642 0.8283
AF-A0A133CKQ7-F1-model_v4 34 601 34 419 0.6621 0.8516
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 37 602 32 417 0.6454 0.8281
A0A0M1Q963 GH43_11 37 602 44 496 0.5819 0.7113
A0A9Q8PNJ5 GH4 1 600 434 866 0.5004 0.8084
AF-A0A7U1BNH7-F1-model_v4 GH10 36 602 27 740 0.4958 0.5869
UJP10085.1 GH154 33 580 683 1168 0.3549 0.6095
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 37 602 32 417 0.6454 0.8281
A0A0M1Q963 GH43_11 37 602 44 496 0.5819 0.7113
A0A9Q8PNJ5 GH4 1 600 434 866 0.5004 0.8084
A0A7U1BNH7 GH10 36 602 27 740 0.4958 0.5869
A0A1Q2TKJ3 GH49 32 601 379 797 0.4906 0.7823
UJP10085.1 GH154 33 580 683 1168 0.3549 0.6095
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7bvt-assembly1.cif.gz_A 38 600 1 391 0.706 0.864
7c71-assembly2.cif.gz_B 40 601 1 415 0.6994 0.8365
7c15-assembly2.cif.gz_B 27 599 2 394 0.6994 0.8563
7c0x-assembly2.cif.gz_B 27 599 2 395 0.6993 0.8555
7c0u-assembly2.cif.gz_B 27 599 4 397 0.6982 0.8564
7c0o-assembly2.cif.gz_B 27 600 3 397 0.6982 0.8545
7c0t-assembly2.cif.gz_B 27 599 3 396 0.6982 0.8553
7c0k-assembly1.cif.gz_A 26 600 2 396 0.6976 0.8526
7c0s-assembly1.cif.gz_A 27 599 3 396 0.6976 0.8545
7c6z-assembly1.cif.gz_A 40 601 1 415 0.6971 0.8339
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q53684-F1-model_v4 37 602 26 425 0.6797 0.8789
AF-Q9KEE7-F1-model_v4 29 602 35 445 0.6684 0.8373
AF-Q8FVS7-F1-model_v4 36 600 22 411 0.6684 0.8435
AF-O06989-F1-model_v4 34 602 30 417 0.6684 0.8529
AF-Q9K491-F1-model_v4 37 600 37 424 0.668 0.8615
AF-Q578M8-F1-model_v4 36 600 22 411 0.6666 0.8414
AF-P94528-F1-model_v4 33 599 27 433 0.6666 0.831
AF-Q2YKZ9-F1-model_v4 36 600 22 411 0.6642 0.8384
AF-P76042-F1-model_v4 37 600 26 430 0.6642 0.8283
AF-Q926H8-F1-model_v4 35 602 16 429 0.6624 0.8096
Download Full SwissProt Results