dbCAN Logo

PROTEIN: HRGMv2_0667_44_8

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0667_44_8.pdb
Genome ID:
HRGMv2_0667
Protein ID:
HRGMv2_0667_44_8

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MRKHLSKALA   LTLAMSSLAS   VSLAEGSVLN   VWCWNDEFQS   RFNAYYPEVK   EVAEDKSTTT 60
LNDGTIVKWT   INPNADNNYQ   NKLDEALLAQ   ESAADDDKID   MFLIEADYAL   KYVDSPYTLD 120
VRADIGLTDG   DLDGQYKYTQ   DIATADGVLK   GVTWQATPGL   FAYRRSIAKD   VLGTDDPAEV 180
QTYLSDWDKF   NEVAAKAAEK   GYKMLSGYDD   SYRTFSNNVS   APWVDGTTVK   VDANLMKWVE 240
QTKEFTDKGY   NNKSKLWDNT   WAADQGPEGK   VFGFFYSTWG   INFTLLGNSL   AVPVSEGGKE 300
EVGNGIFGDY   AVCEGPQSYY   WGGTWMCAAA   GTDNAETIKN   VMLKLTCDKA   IDKQITLDTQ 360
DYTNNIEAMN   EIAGSDYQSA   FLGGQNHIAL   FAKSAEKIDM   SNAGPYDQGC   NEQMQNAFRD 420
YFDGTIDIDA   AKKNFETAIM   ELYPELTEVV   WPE 453
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F002-F1-model_v4 5 446 32 439 0.7291 0.8091
AF-K0EWS5-F1-model_v4 23 452 24 457 0.7264 0.7847
AF-P71619-F1-model_v4 23 447 33 428 0.7191 0.8189
AF-K0F2E6-F1-model_v4 23 447 40 436 0.7186 0.8222
AF-K0EWS9-F1-model_v4 8 446 32 463 0.7182 0.7771
AF-K0F1Y0-F1-model_v4 21 445 47 433 0.718 0.8325
AF-A0A133CPC5-F1-model_v4 23 447 31 423 0.7165 0.8116
AF-P76042-F1-model_v4 22 446 24 430 0.7163 0.792
AF-Q8DNN7-F1-model_v4 26 447 34 436 0.7086 0.7961
AF-K0F8J3-F1-model_v4 25 447 29 436 0.7055 0.7843
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 24 448 32 416 0.678 0.7792
AF-K8E205-F1-model_v4 GH32 24 426 32 344 0.627 0.7918
AF-A0A7U1BNH7-F1-model_v4 GH10 24 451 28 738 0.5507 0.7275
A0A9Q8PNJ5 GH4 23 446 468 866 0.5482 0.8132
AF-A0A1Q2TKJ3-F1-model_v4 GH49 24 446 385 797 0.5345 0.7455
AF-A0A1B0VLS2-F1-model_v4 CBM0 23 448 543 948 0.508 0.7697
A0A242CSU4 CBM35 24 447 574 969 0.4976 0.7777
UJP10085.1 GH154 1 426 311 1168 0.4148 0.6677
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 24 448 32 416 0.678 0.7792
K8E205 GH32 24 426 32 344 0.627 0.7918
A0A7U1BNH7 GH10 24 451 28 738 0.5507 0.7275
A0A9Q8PNJ5 GH4 23 446 468 866 0.5482 0.8132
A0A1Q2TKJ3 GH49 24 446 385 797 0.5345 0.7455
A0A242CSU4 CBM35 24 447 574 969 0.4976 0.7777
UJP10085.1 GH154 1 426 311 1168 0.4148 0.6677
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5ixp-assembly1.cif.gz_A 25 444 1 393 0.8269 0.8984
3uor-assembly2.cif.gz_B 27 448 1 389 0.773 0.8535
6x84-assembly2.cif.gz_B 24 447 1 411 0.7556 0.8114
4rk2-assembly1.cif.gz_A 25 444 1 393 0.7507 0.8213
7vfq-assembly1.cif.gz_A 26 450 1 394 0.7484 0.8192
6wpn-assembly1.cif.gz_A 28 448 1 395 0.7482 0.8177
7c6z-assembly1.cif.gz_A 27 447 1 415 0.7475 0.798
7vfr-assembly1.cif.gz_A 26 450 1 397 0.7474 0.8151
7vfq-assembly2.cif.gz_B 26 450 1 396 0.7472 0.8159
2z8d-assembly2.cif.gz_B 21 450 1 399 0.7472 0.8135
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29822-F1-model_v4 24 444 26 422 0.7709 0.8603
AF-P94528-F1-model_v4 25 445 32 433 0.7603 0.8489
AF-Q9K491-F1-model_v4 16 446 24 424 0.7387 0.8222
AF-Q9KEE7-F1-model_v4 26 446 44 445 0.7308 0.8291
AF-P76042-F1-model_v4 22 446 24 430 0.7163 0.792
AF-Q8FVS7-F1-model_v4 24 446 23 411 0.7134 0.8063
AF-Q578M8-F1-model_v4 24 446 23 411 0.7126 0.8055
AF-Q2YKZ9-F1-model_v4 24 446 23 411 0.711 0.8038
AF-Q53684-F1-model_v4 21 446 23 423 0.7069 0.8097
AF-O07009-F1-model_v4 15 448 25 419 0.7053 0.7951
Download Full SwissProt Results