PROTEIN: HRGMv2_0667_26_27
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Protein File & Metadata
Source:
HRGMv2_0667_26_27.pdb
Genome ID:
Protein ID:
HRGMv2_0667_26_27
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Protein Sequence
MRKQGIDGTG MLNLYDRVTG IFNEIFDSRL LTAAIFALIG YCSLFMQRKF PMRWMIFVLF 60 GMILLAFVTL TARTPGQKAR VHFHKGMAGL WFALHGMMVV SGLFYEDWLP ESVPLLICYP 120 IVFSVFVSRD DDSTFRSILR GAVFAVLPFL AWSYAAVPLS FAYPGYKGVF YDANCLSMCC 180 IVMATAALLL AYASFMERRM KAAAAYLLLG VWAAATLLAT LSRSGLLAFA GVMVILVSAI 240 IAGTAKHPAR LLALVAAFIV LCGAAGVKIT KDKMYEAAVE DYNLAVYNHE TYGNPITVPK 300 PEDRTISMDD LTSDRWGIWT TILENLTWNG HQDSVIWEWV AKDGAGDRHY NAHNAFFGVT 360 YNNGFIAGLL LVAYTALAFI RALRYYWAHR KESPYAATPL AFCTVFILVG MFESVYAPFS 420 VIGCAYFLVQ APLWRAE 437
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44067-F1-model_v4 | 25 | 435 | 3 | 399 | 0.6378 |
0.6903 |
| AF-A0A286V175-F1-model_v4 | 24 | 437 | 5 | 474 | 0.6085 |
0.6831 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A212QE91-F1-model_v4 | GT2 | 26 | 437 | 3 | 574 | 0.5623 |
0.7245 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 24 | 437 | 1 | 572 | 0.5616 |
0.7199 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 26 | 437 | 3 | 574 | 0.5597 |
0.7213 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 23 | 437 | 2 | 575 | 0.5413 |
0.6944 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 25 | 437 | 19 | 445 | 0.5278 |
0.7076 |
| AF-B5YD26-F1-model_v4 | GT9 | 6 | 437 | 6 | 444 | 0.5253 |
0.6856 |
| AF-A0A160T1R3-F1-model_v4 | GH39 | 1 | 437 | 19 | 1036 | 0.5043 |
0.7147 |
| USX27957.1 | GT9 | 27 | 437 | 15 | 530 | 0.502 |
0.6753 |
| AF-A0A0C5WHY3-F1-model_v4 | GT4 | 23 | 437 | 1 | 396 | 0.493 |
0.6861 |
| AF-D5MJ04-F1-model_v4 | GT9 | 22 | 437 | 21 | 414 | 0.4861 |
0.6864 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 25 | 437 | 19 | 445 | 0.5278 |
0.7076 |
| B5YD26 | GT9 | 6 | 437 | 6 | 444 | 0.5253 |
0.6856 |
| A0A160T1R3 | GH39 | 1 | 437 | 19 | 1036 | 0.5043 |
0.7147 |
| USX27957.1 | GT9 | 27 | 437 | 15 | 530 | 0.502 |
0.6753 |
| A0A0C5WHY3 | GT4 | 23 | 437 | 1 | 396 | 0.493 |
0.6861 |
| D5MJ04 | GT9 | 22 | 437 | 21 | 414 | 0.4861 |
0.6864 |
| A9WHX8 | GH39 | 26 | 437 | 659 | 1081 | 0.4702 |
0.7085 |
| R4KL74 | GT4 | 26 | 437 | 47 | 441 | 0.4669 |
0.6805 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q02729-F1-model_v4 | 26 | 437 | 5 | 402 | 0.6411 |
0.7169 |
| AF-P44067-F1-model_v4 | 25 | 435 | 3 | 399 | 0.6378 |
0.6903 |
| AF-O32270-F1-model_v4 | 24 | 437 | 59 | 478 | 0.6147 |
0.6982 |