PROTEIN: HRGMv2_0653_35_48
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Protein File & Metadata
Source:
HRGMv2_0653_35_48.pdb
Genome ID:
Protein ID:
HRGMv2_0653_35_48
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Detailed structural information will appear here after analysis...
Protein Sequence
MKKHISHNSA ESTKAHFATQ DSSSPHSTPS NIEPRQTQQN ETERLDRLME FLHIIIASIQ 60 QDSTKAHLDS LMQEFSSLTH TDIKLLANHS NGRIVLAELI TLLRERIYTL LTQGVLCGVE 120 YLSLLLFTHI STYTKFENIS QDTRFDVFIT MAQKSLFVDG NSDVENLLFI ELYMVAKILR 180 DMGNFDRLIL EYISLICLVD INLPLSLEHA NFIIKHFENL GVDMSIMLNA LKNQLNKEVY 240 FAYPSQRRRS ILNWQLHCFW NVSHFFNHHA WLELYEVWKE LFYTMLEKGS IEGIDEAMYM 300 QFFMYHLCGN NFHTQEQWAR FCKDIDRVAV RHYERFAKNQ GIYGVSNHQP TDKIRIGILR 360 DRLVANSPYK VEFSLLSNLL SNQAFRERYE IRIYAMKLFE KSVDDEKIVQ SYENLGIPVI 420 DVVSGFHTQG FYNSHLQKAL AIKEALNTDN ISILLSPNNG YGISDFILAS RSAKSQIYYS 480 HGNFVYDVPC VDSKMTHICQ NKRHISHEGY EFYGVPVKML ERFYNPELDS QAKEKIAQIR 540 SEFPQDSVIL GSIGRLTKLN SKEYWQCVIE IMQRYPQSIY LACGGGNESL ISECITSCFT 600 QEAEAQAFLQ RMHFTGYIDS GIYGHIIDIW LDSFPLEQGE SRIEYVAKGG LSIALSKIPQ 660 EQRIEGIQTS LKAWQSIPNK DGSLKTRADF DNAFALIKES QLPLLAFSLK EYVEKATALL 720 EHFVSGDRAY IENLRELGAK ARAVGDEMKE YEGILAFMDA ITQTQS 766
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5L8JVI8 | GT0 | 53 | 766 | 1 | 740 | 0.7763 |
0.8274 |
| AF-A0A345J8J8-F1-model_v4 | GT0 | 98 | 765 | 12 | 656 | 0.7312 |
0.8114 |
| A0A1T5GGI2 | GT0 | 225 | 766 | 22 | 496 | 0.6322 |
0.8147 |
| AF-A0A076PLY1-F1-model_v4 | GT41 | 105 | 766 | 4 | 518 | 0.578 |
0.714 |
| AF-A0A6M4GQI0-F1-model_v4 | GT41 | 65 | 766 | 21 | 601 | 0.5722 |
0.6744 |
| AF-A0A5C1MB47-F1-model_v4 | GT41 | 12 | 766 | 22 | 570 | 0.5716 |
0.6973 |
| AF-A0A5P8XE64-F1-model_v4 | GT41 | 152 | 766 | 13 | 526 | 0.5712 |
0.7164 |
| AF-A0A090AA90-F1-model_v4 | GT41 | 6 | 766 | 6 | 588 | 0.5658 |
0.6555 |
| A0A4R3J9A3 | GT41 | 59 | 766 | 15 | 654 | 0.5622 |
0.6321 |
| AF-A0A7G7VNY7-F1-model_v4 | GT41 | 9 | 766 | 48 | 669 | 0.5566 |
0.6475 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QOX80353.1 | GT41 | 131 | 766 | 16 | 530 | 0.5881 |
0.7225 |
| UUE93310.1 | GT41 | 12 | 766 | 25 | 527 | 0.5799 |
0.7416 |
| A0A6M4GQI0 | GT41 | 65 | 766 | 21 | 601 | 0.5722 |
0.6744 |
| A0A5C1MB47 | GT41 | 12 | 766 | 22 | 570 | 0.5716 |
0.6973 |
| A0A090AA90 | GT41 | 6 | 766 | 6 | 588 | 0.5658 |
0.6555 |
| A0A4R3J9A3 | GT41 | 59 | 766 | 15 | 654 | 0.5622 |
0.6321 |
| A0A857J2J0 | GT41 | 19 | 766 | 5 | 532 | 0.5599 |
0.6924 |
| A0A6P1M707 | GT41 | 9 | 766 | 14 | 547 | 0.5558 |
0.6726 |
| B5W9F8 | GT41 | 109 | 766 | 90 | 670 | 0.5542 |
0.6845 |
| A0A2K8WTA4 | GT41 | 106 | 766 | 102 | 725 | 0.5489 |
0.6593 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2xgm-assembly1.cif.gz_A | 190 | 766 | 1 | 509 | 0.5666 |
0.6912 |
| 2vsn-assembly1.cif.gz_A | 150 | 766 | 1 | 531 | 0.5663 |
0.6799 |
| 2xgs-assembly1.cif.gz_A | 160 | 766 | 14 | 539 | 0.5647 |
0.6881 |
| 5djs-assembly1.cif.gz_A | 12 | 766 | 18 | 517 | 0.5638 |
0.7037 |
| 5vie-assembly1.cif.gz_A | 153 | 766 | 14 | 658 | 0.5165 |
0.6059 |
| 5nps-assembly1.cif.gz_A | 153 | 766 | 38 | 681 | 0.507 |
0.6029 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.