PROTEIN: HRGMv2_0629_16_2
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Protein File & Metadata
Source:
HRGMv2_0629_16_2.pdb
Genome ID:
Protein ID:
HRGMv2_0629_16_2
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Protein Sequence
MLNLVLSIFG YFVSICINFA LTPFILKSLG DESFGLLMLV VSFANQIIFA VNAFNAVPTR 60 LVASNYFLGE FEKAGEFYNK VVSFSVVIGL AAVLFSLAFG GVIASWLGAQ EGVKTALQLT 120 IILYAAQFAL ATLCSGVQTK IFVTSKLYLV SFLNICYYSC YATFIIIAFV FFTPQMHYVA 180 LSAALFQLAA LLTLNLVAAR LKVRLAFSRF DLHKSVKIVK SSLANAFNAL PNLILHSFTL 240 LFCNAFLGAA ATAVLYLSKV IPLSLEMLSN SINASVGPRI LQLYEAGETQ KLVAFLRLCV 300 KVCASLVGVV TVVFISVGAR FFAYWLPFKT PSEIYEIYLL TLIFLTPIIL FALSGILITL 360 NTYTAKLRRP FVANLTMCVL VVISELVILL LGGGLMQLAV CVSVFFTARL ALFDIANAAV 420 NLRLCFTTFY PTLFRACAVL LGLCGLFCWV ENFFKQSGLF SLGLLCVCFG IFGLLSCFVL 480 LLDKNEKNIA LDKLRAIKAR FTQEKR 506
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0PAV6-F1-model_v4 | 1 | 426 | 15 | 441 | 0.7977 |
0.8954 |
| AF-Q2G262-F1-model_v4 | 1 | 496 | 7 | 476 | 0.7835 |
0.8381 |
| AF-H9L497-F1-model_v4 | 1 | 492 | 8 | 481 | 0.7814 |
0.8407 |
| AF-A0A133CZZ9-F1-model_v4 | 1 | 495 | 19 | 543 | 0.7766 |
0.8415 |
| AF-Q2FXH6-F1-model_v4 | 1 | 494 | 8 | 545 | 0.7763 |
0.8479 |
| AF-P77377-F1-model_v4 | 1 | 492 | 8 | 481 | 0.7763 |
0.8358 |
| AF-Q329X0-F1-model_v4 | 1 | 427 | 4 | 416 | 0.7693 |
0.8656 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 495 | 4 | 477 | 0.7685 |
0.819 |
| AF-A0A132ZC46-F1-model_v4 | 1 | 506 | 10 | 536 | 0.7677 |
0.8118 |
| AF-Q32ET1-F1-model_v4 | 1 | 490 | 4 | 511 | 0.7665 |
0.8169 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 499 | 8 | 512 | 0.7806 |
0.8206 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 493 | 47 | 545 | 0.725 |
0.7906 |
| QJC17489.1 | GT2 | 1 | 503 | 348 | 849 | 0.7042 |
0.8943 |
| QNU38870.1 | GT4 | 1 | 495 | 3 | 475 | 0.6884 |
0.812 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 506 | 13 | 832 | 0.6508 |
0.8308 |
| A0A4V3CWU6 | GT4 | 1 | 491 | 2 | 554 | 0.6427 |
0.831 |
| AF-D7BDH0-F1-model_v4 | GT4 | 1 | 490 | 6 | 481 | 0.6327 |
0.8614 |
| AF-F2NKF2-F1-model_v4 | GT4 | 1 | 493 | 4 | 492 | 0.6295 |
0.8392 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 500 | 5 | 586 | 0.6234 |
0.8129 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 506 | 13 | 717 | 0.6116 |
0.8066 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 499 | 8 | 512 | 0.7806 |
0.8206 |
| A0A160T2N7 | GT28 | 1 | 493 | 47 | 545 | 0.725 |
0.7906 |
| QJC17489.1 | GT2 | 1 | 503 | 348 | 849 | 0.7042 |
0.8943 |
| QNU38870.1 | GT4 | 1 | 495 | 3 | 475 | 0.6884 |
0.812 |
| A0A2U8PPB3 | GT4 | 1 | 506 | 2 | 540 | 0.6549 |
0.8225 |
| A0A517Z2I8 | GT2 | 1 | 506 | 13 | 832 | 0.6508 |
0.8308 |
| A0A4V3CWU6 | GT4 | 1 | 491 | 2 | 554 | 0.6427 |
0.831 |
| D7BDH0 | GT4 | 1 | 490 | 6 | 481 | 0.6327 |
0.8614 |
| F2NKF2 | GT4 | 1 | 493 | 4 | 492 | 0.6295 |
0.8392 |
| A0A3Q9G719 | GT4 | 1 | 500 | 5 | 586 | 0.6234 |
0.8129 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7wag-assembly1.cif.gz_A | 1 | 493 | 3 | 514 | 0.7998 |
0.852 |
| 7waw-assembly1.cif.gz_A | 2 | 487 | 1 | 496 | 0.7841 |
0.8291 |
| 5c6n-assembly1.cif.gz_A | 1 | 432 | 18 | 446 | 0.7582 |
0.8532 |
| 5y50-assembly1.cif.gz_A | 1 | 424 | 8 | 437 | 0.7545 |
0.8592 |
| 4mlb-assembly1.cif.gz_C | 1 | 425 | 19 | 449 | 0.7491 |
0.855 |
| 6hfb-assembly3.cif.gz_C | 1 | 425 | 19 | 448 | 0.7479 |
0.8529 |
| 5xjj-assembly1.cif.gz_A | 1 | 424 | 12 | 438 | 0.7454 |
0.8495 |
| 3wbn-assembly1.cif.gz_A | 1 | 425 | 17 | 447 | 0.7445 |
0.8482 |
| 6nc6-assembly2.cif.gz_B | 1 | 488 | 1 | 461 | 0.7416 |
0.799 |
| 3vvn-assembly1.cif.gz_A | 1 | 425 | 18 | 442 | 0.7367 |
0.8352 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 1 | 502 | 3 | 503 | 0.8422 |
0.8694 |
| AF-P58594-F1-model_v4 | 1 | 426 | 16 | 429 | 0.784 |
0.8977 |
| AF-Q48457-F1-model_v4 | 1 | 497 | 8 | 485 | 0.7817 |
0.8313 |
| AF-Q46378-F1-model_v4 | 1 | 498 | 10 | 531 | 0.7765 |
0.8302 |
| AF-P77377-F1-model_v4 | 1 | 492 | 8 | 481 | 0.7763 |
0.8358 |
| AF-P33699-F1-model_v4 | 1 | 496 | 11 | 485 | 0.7683 |
0.8281 |
| AF-Q9Z7H5-F1-model_v4 | 1 | 499 | 11 | 536 | 0.767 |
0.8258 |
| AF-P0AAA8-F1-model_v4 | 1 | 428 | 4 | 416 | 0.7647 |
0.8606 |
| AF-O34674-F1-model_v4 | 1 | 495 | 6 | 538 | 0.7613 |
0.8258 |
| AF-P0AF16-F1-model_v4 | 1 | 489 | 4 | 511 | 0.7607 |
0.8122 |