PROTEIN: HRGMv2_0587_1_193
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Protein File & Metadata
Source:
HRGMv2_0587_1_193.pdb
Genome ID:
Protein ID:
HRGMv2_0587_1_193
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Detailed structural information will appear here after analysis...
Protein Sequence
MLFCAGSGFG LLNALLVKLH YFREEVADIM IPGGGIWDRW AERLCCTKIF NRVWTNDGAA 60 ERERVARRLW DEGRGKEAVR IVLGDGKVPS DYDSFFLVGD SRFAKAVYYT LAHRGVAPKL 120 SLVEGGIASY IENISQPHHW PDMDSTAEGR LEAMYLFRPP LDRGGSEKPV FRIPMLTECV 180 EGMVAARTIF GEETLPEARY IFLADDTSRL SGASDHLMIL DRLGAMVGKE NILVRPHPAS 240 EEWAPLFRLH GYRVSDSIVP WEVLALMDEQ PRRVITAVAS HGVITSWLAS GKCWPMILFK 300 DLAVISRHWY FDAPVYNDYL QTAKKAVEMD AGGLFLPRNN MELSLIVKYL HREGY 355
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1A6Z508-F1-model_v4 | 1 | 353 | 3 | 356 | 0.818 |
0.845 |
| AF-A0A286V7D5-F1-model_v4 | 1 | 350 | 4 | 362 | 0.7246 |
0.767 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A346CLQ1-F1-model_v4 | GT100 | 1 | 335 | 4 | 333 | 0.7041 |
0.7597 |
| QDB89934.1 | GT100 | 1 | 304 | 3 | 320 | 0.6991 |
0.7929 |
| AF-Q077S0-F1-model_v4 | GT100 | 1 | 336 | 4 | 335 | 0.6988 |
0.7525 |
| Q077S0 | GT100 | 1 | 336 | 4 | 335 | 0.6988 |
0.7525 |
| AF-A0A5C0UE81-F1-model_v4 | GT28 | 1 | 355 | 6 | 332 | 0.5928 |
0.6716 |
| AF-B1IK54-F1-model_v4 | GT2 | 1 | 354 | 566 | 919 | 0.5564 |
0.8158 |
| AF-A0A1W5ZSM5-F1-model_v4 | GT4 | 1 | 355 | 4 | 359 | 0.5559 |
0.6199 |
| A0A0C1R8G8 | GT2 | 1 | 355 | 729 | 1081 | 0.5339 |
0.8128 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A346CLQ1 | GT100 | 1 | 335 | 4 | 333 | 0.7041 |
0.7597 |
| QDB89934.1 | GT100 | 1 | 304 | 3 | 320 | 0.6991 |
0.7929 |
| Q077S0 | GT100 | 1 | 336 | 4 | 335 | 0.6988 |
0.7525 |
| WFG34903.1 | GT4 | 1 | 355 | 3 | 354 | 0.6215 |
0.6758 |
| A0A346AC34 | GT4 | 1 | 355 | 4 | 337 | 0.6148 |
0.6848 |
| A0A7G9GPG9 | GT4 | 1 | 355 | 4 | 319 | 0.611 |
0.6988 |
| WFB34860.1 | GT19 | 1 | 355 | 4 | 339 | 0.608 |
0.684 |
| UDQ97930.1 | GT28 | 1 | 355 | 20 | 373 | 0.5798 |
0.6376 |
| A0A5C0UFS9 | GT28 | 1 | 355 | 6 | 337 | 0.5787 |
0.6522 |
| B1IK54 | GT2 | 1 | 354 | 566 | 919 | 0.5564 |
0.8158 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5wc8-assembly2.cif.gz_A | 1 | 343 | 15 | 381 | 0.6277 |
0.6945 |
| 2zwi-assembly2.cif.gz_B | 1 | 343 | 6 | 371 | 0.6239 |
0.6831 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.