PROTEIN: HRGMv2_0563_14_4
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Protein File & Metadata
Source:
HRGMv2_0563_14_4.pdb
Genome ID:
Protein ID:
HRGMv2_0563_14_4
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Protein Sequence
MKFAIIRRNG LGDFISATVP MCYYIKETYP DSELHLFLSE QNAELAKHFF PNEFVYMIPS 60 GNKYLEAIKT ALCHRDIVPN IGISPAPSYN KLCGIFLNLL GAKKIYGLYN AEDSPCVNFF 120 YSKLIHPSNK DHVSLQNIKL FTSDYLTLPE RFFPKISLKS PPPHMFWSI 169
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37421-F1-model_v4 | 1 | 169 | 1 | 213 | 0.6181 |
0.8457 |
| AF-P37692-F1-model_v4 | 1 | 169 | 1 | 213 | 0.6164 |
0.8435 |
| AF-Q329N5-F1-model_v4 | 1 | 169 | 1 | 213 | 0.6162 |
0.8432 |
| AF-G3XD35-F1-model_v4 | 1 | 169 | 1 | 207 | 0.6028 |
0.8228 |
| AF-A0A0H3H4I2-F1-model_v4 | 1 | 169 | 14 | 193 | 0.5999 |
0.8288 |
| AF-P44011-F1-model_v4 | 1 | 169 | 2 | 178 | 0.5929 |
0.8108 |
| AF-K0F1W8-F1-model_v4 | 1 | 169 | 3 | 208 | 0.5928 |
0.7947 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0H3IEQ0-F1-model_v4 | GT9 | 1 | 169 | 1 | 181 | 0.7444 |
0.8448 |
| AF-A0A455TZ12-F1-model_v4 | GT9 | 1 | 169 | 6 | 182 | 0.7389 |
0.8318 |
| AF-A0A1B3B881-F1-model_v4 | GT9 | 1 | 149 | 1 | 145 | 0.7327 |
0.8225 |
| AF-C7BJI4-F1-model_v4 | GT9 | 1 | 169 | 1 | 168 | 0.6677 |
0.8875 |
| AF-A0A068R479-F1-model_v4 | GT9 | 1 | 169 | 1 | 172 | 0.6654 |
0.8872 |
| AF-A0A068QTQ7-F1-model_v4 | GT9 | 1 | 169 | 1 | 204 | 0.6644 |
0.8775 |
| AF-A0A0G3CS63-F1-model_v4 | GT9 | 1 | 169 | 7 | 173 | 0.6608 |
0.8952 |
| AF-Q8GFD2-F1-model_v4 | GT9 | 1 | 169 | 1 | 204 | 0.6596 |
0.8825 |
| Q8GFD2 | GT9 | 1 | 169 | 1 | 204 | 0.6596 |
0.8825 |
| AF-A0A1Z4T516-F1-model_v4 | GT9 | 1 | 169 | 1 | 167 | 0.6153 |
0.8235 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G3CS63 | GT9 | 1 | 169 | 7 | 173 | 0.6608 |
0.8952 |
| Q8GFD2 | GT9 | 1 | 169 | 1 | 204 | 0.6596 |
0.8825 |
| A0A7R7AI72 | GT9 | 1 | 169 | 1 | 210 | 0.6265 |
0.8483 |
| A0A2Z5WZL6 | GT9 | 1 | 169 | 2 | 168 | 0.619 |
0.8292 |
| A0A2Z5UWL3 | GT9 | 1 | 169 | 11 | 222 | 0.6173 |
0.845 |
| C7P706 | GT9 | 1 | 169 | 1 | 180 | 0.617 |
0.8479 |
| A0A2I7N9K7 | GT9 | 1 | 169 | 1 | 207 | 0.615 |
0.8321 |
| U5T4B5 | GT9 | 1 | 169 | 7 | 230 | 0.6137 |
0.8477 |
| A0A0B7J103 | GT9 | 1 | 169 | 9 | 217 | 0.6132 |
0.8362 |
| A0A1B1E957 | GT9 | 1 | 169 | 2 | 215 | 0.6132 |
0.8423 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37421-F1-model_v4 | 1 | 169 | 1 | 213 | 0.6181 |
0.8457 |
| AF-P37692-F1-model_v4 | 1 | 169 | 1 | 213 | 0.6164 |
0.8435 |
| AF-P44011-F1-model_v4 | 1 | 169 | 2 | 178 | 0.5929 |
0.8108 |