PROTEIN: HRGMv2_0558_1_17
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0558_1_17.pdb
Genome ID:
Protein ID:
HRGMv2_0558_1_17
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MFSPMLVFLR NWTLPLAMLA GGIGFPIFRH LSFLTPYLIF TMLLLTFCKV PFEDLKFRLV 60 HAWLLIIQIG GAVAVYTLLS PMNVLVAEGA FICVIAPTAT AAAVITDKLG GSAGSLISYT 120 LLANLGTAIA APALFPLIHP LGHDMSFWIA FLVILRKVFP LLICPFIAAI LLRRFTPAIH 180 KILTRYNSTA FYLWAVALIV VMAQTVNTLV NEPEDGWTEI WIALAAGAVC CLQFYIGKRI 240 GSRYRERISG GQSLGQKNTI LAIWMAHVYM SPITAIGAGS YVVWQNIINS WQLWKQRKNI 300 EAGLIDPTKK EV 312
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GHE8-F1-model_v4 | 2 | 310 | 1 | 305 | 0.7983 |
0.836 |
| AF-Q2FVU6-F1-model_v4 | 1 | 305 | 1 | 305 | 0.7945 |
0.8282 |
| AF-Q9HYX6-F1-model_v4 | 1 | 309 | 2 | 309 | 0.7943 |
0.8271 |
| AF-Q8ZKL0-F1-model_v4 | 2 | 308 | 1 | 304 | 0.7917 |
0.836 |
| AF-Q9I375-F1-model_v4 | 27 | 308 | 6 | 291 | 0.7351 |
0.8145 |
| AF-Q5PT50-F1-model_v4 | 3 | 306 | 1 | 330 | 0.733 |
0.808 |
| AF-K0EW89-F1-model_v4 | 28 | 306 | 6 | 287 | 0.7273 |
0.8129 |
| AF-P39836-F1-model_v4 | 8 | 309 | 4 | 325 | 0.7245 |
0.796 |
| AF-P39879-F1-model_v4 | 4 | 306 | 1 | 324 | 0.7241 |
0.7941 |
| AF-K0FEI7-F1-model_v4 | 3 | 306 | 1 | 327 | 0.7239 |
0.7929 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WIA38770.1 | CBM20 | 1 | 308 | 51 | 658 | 0.5687 |
0.8322 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WIA38770.1 | CBM20 | 1 | 308 | 51 | 658 | 0.5687 |
0.8322 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6lgz-assembly1.cif.gz_A | 1 | 309 | 2 | 304 | 0.7995 |
0.8355 |
| 3zuy-assembly1.cif.gz_A | 1 | 305 | 1 | 308 | 0.7968 |
0.8341 |
| 3zux-assembly1.cif.gz_A | 1 | 305 | 1 | 308 | 0.7966 |
0.834 |
| 7cyk-assembly2.cif.gz_B | 7 | 309 | 1 | 296 | 0.7959 |
0.8409 |
| 7cyg-assembly2.cif.gz_B | 7 | 310 | 1 | 299 | 0.7959 |
0.8367 |
| 4n7w-assembly1.cif.gz_A | 2 | 309 | 1 | 306 | 0.7903 |
0.8239 |
| 4n7x-assembly1.cif.gz_A | 1 | 307 | 1 | 306 | 0.7137 |
0.7488 |
| 7fci-assembly1.cif.gz_A | 27 | 302 | 6 | 297 | 0.6606 |
0.7524 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZKL0-F1-model_v4 | 2 | 308 | 1 | 304 | 0.7917 |
0.836 |
| AF-P55190-F1-model_v4 | 10 | 308 | 1 | 305 | 0.7894 |
0.8378 |
| AF-O34524-F1-model_v4 | 1 | 306 | 2 | 313 | 0.7888 |
0.8383 |
| AF-Q5PT50-F1-model_v4 | 3 | 306 | 1 | 330 | 0.733 |
0.808 |
| AF-Q5PT53-F1-model_v4 | 3 | 306 | 1 | 330 | 0.7303 |
0.8051 |
| AF-P45946-F1-model_v4 | 6 | 310 | 3 | 346 | 0.7269 |
0.805 |
| AF-P39836-F1-model_v4 | 8 | 309 | 4 | 325 | 0.7245 |
0.796 |
| AF-P39879-F1-model_v4 | 4 | 306 | 1 | 324 | 0.7241 |
0.7941 |
| AF-Q0GE19-F1-model_v4 | 1 | 312 | 1 | 337 | 0.7164 |
0.7723 |
| AF-Q6DHK8-F1-model_v4 | 2 | 312 | 2 | 335 | 0.7163 |
0.7698 |