PROTEIN: HRGMv2_0505_81_4
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0505_81_4.pdb
Genome ID:
Protein ID:
HRGMv2_0505_81_4
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MSKYKIKKVE TEQEMTQFIR FSEQLYARCP YYVPDMESEI REYFDPKSNP GLEFSSIQPF 60 LCIDVDGNVV GRIAGIINPV ANQTWQVKNV RFGYIDFIDD IEVSGALLDA VAEWGRAQGM 120 TRIQGPMGIS DFDKEGMLVE DFDKVGSEVT IYNYPYYPKH MEQLGFQKEA DWIQIRVDVP 180 KEVPERFSHV SALLKKRYGW RVHKMTSREI EKEGYGRKVF QLLNEAYQPL FGFSKLSDRQ 240 VDAFVKKYLT LVDLNLAPCI VDKEGNLIGI AVTMASLTRA LQKSKGRLLP WGWYHLLKSL 300 KWKHEDHVEM LLIAVKPEYQ RLGVNALMFD DLIPVYNRYH FKYAETGPQL EDNEKELNQW 360 RTLNPTFEKR RRCYGKEL 378
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 378 | 15 | 390 | 0.9136 |
0.9436 |
| AF-X8EWX4-F1-model_v4 | 1 | 378 | 18 | 393 | 0.9016 |
0.9358 |
| AF-P9WJM7-F1-model_v4 | 2 | 378 | 1 | 313 | 0.7271 |
0.8151 |
| AF-Q9CBC9-F1-model_v4 | 3 | 378 | 1 | 308 | 0.7186 |
0.8145 |
| AF-K0EMI4-F1-model_v4 | 1 | 378 | 10 | 314 | 0.709 |
0.8179 |
| AF-Q54G61-F1-model_v4 | 3 | 378 | 1 | 307 | 0.6682 |
0.7597 |
| AF-Q54DW0-F1-model_v4 | 3 | 378 | 1 | 321 | 0.6632 |
0.74 |
| AF-K0EYT8-F1-model_v4 | 2 | 377 | 11 | 259 | 0.6378 |
0.8004 |
| AF-Q19661-F1-model_v4 | 1 | 377 | 1 | 294 | 0.6324 |
0.7582 |
| AF-Q09318-F1-model_v4 | 2 | 377 | 3 | 290 | 0.6247 |
0.7578 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 378 | 14 | 339 | 0.753 |
0.8411 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 378 | 410 | 739 | 0.5028 |
0.7566 |
| A0A7C8H9M3 | GH3 | 1 | 376 | 550 | 877 | 0.4888 |
0.7808 |
| UPL03096.1 | GH3 | 1 | 378 | 291 | 965 | 0.4872 |
0.7051 |
| AF-A0A1D9PUT2-F1-model_v4 | GH3 | 1 | 378 | 583 | 967 | 0.4872 |
0.7062 |
| AF-A0A7U2MF49-F1-model_v4 | GH3 | 1 | 378 | 502 | 833 | 0.4842 |
0.7517 |
| AF-A0A146FCW8-F1-model_v4 | GH3 | 1 | 378 | 534 | 859 | 0.484 |
0.7721 |
| AF-A0A384J7C8-F1-model_v4 | GH3 | 1 | 378 | 583 | 955 | 0.4835 |
0.7067 |
| AF-A2QDM1-F1-model_v4 | GH3 | 1 | 378 | 535 | 859 | 0.4828 |
0.7723 |
| AF-G2XQQ8-F1-model_v4 | GH3 | 1 | 378 | 607 | 980 | 0.4824 |
0.7075 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 378 | 14 | 339 | 0.753 |
0.8411 |
| A0A7C8H9M3 | GH3 | 1 | 376 | 550 | 877 | 0.4888 |
0.7808 |
| UPL03096.1 | GH3 | 1 | 378 | 291 | 965 | 0.4872 |
0.7051 |
| A0A7U2MF49 | GH3 | 1 | 378 | 502 | 833 | 0.4842 |
0.7517 |
| V9M3A9 | GH3 | 1 | 376 | 154 | 858 | 0.4729 |
0.6641 |
| A0A7H8QUW2 | GH3 | 1 | 378 | 207 | 946 | 0.4721 |
0.6796 |
| Q6MFP1 | GH3 | 1 | 378 | 581 | 1082 | 0.4668 |
0.6963 |
| A0A161HFD8 | GH3 | 1 | 378 | 208 | 967 | 0.4658 |
0.6744 |
| E5A892 | GH3 | 1 | 378 | 541 | 883 | 0.4653 |
0.7148 |
| G1XST4 | GH3 | 1 | 378 | 605 | 1002 | 0.4652 |
0.6797 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7q3a-assembly1.cif.gz_A | 1 | 378 | 17 | 339 | 0.7333 |
0.8279 |
| 7q3a-assembly2.cif.gz_B | 1 | 378 | 16 | 340 | 0.7276 |
0.8185 |
| 5kgh-assembly1.cif.gz_A | 4 | 378 | 1 | 315 | 0.7268 |
0.8136 |
| 2c27-assembly1.cif.gz_A | 7 | 377 | 1 | 301 | 0.7256 |
0.8245 |
| 5kga-assembly1.cif.gz_B | 4 | 378 | 1 | 315 | 0.7241 |
0.8101 |
| 5kf2-assembly1.cif.gz_A | 4 | 378 | 1 | 315 | 0.7233 |
0.8113 |
| 5kgh-assembly1.cif.gz_B | 4 | 378 | 1 | 312 | 0.7196 |
0.8092 |
| 5kf1-assembly1.cif.gz_B | 4 | 378 | 1 | 311 | 0.7192 |
0.8099 |
| 1p0h-assembly1.cif.gz_A | 4 | 376 | 1 | 290 | 0.7165 |
0.8293 |
| 2wpw-assembly4.cif.gz_D | 3 | 378 | 1 | 321 | 0.6837 |
0.7647 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 378 | 15 | 390 | 0.9136 |
0.9436 |
| AF-D3Q4A8-F1-model_v4 | 3 | 378 | 1 | 306 | 0.7639 |
0.8607 |
| AF-Q5EDG0-F1-model_v4 | 2 | 376 | 1 | 301 | 0.7565 |
0.8582 |
| AF-C6WPR7-F1-model_v4 | 3 | 376 | 1 | 297 | 0.7557 |
0.8627 |
| AF-C7QKH8-F1-model_v4 | 1 | 376 | 1 | 314 | 0.7535 |
0.8413 |
| AF-D1A4F4-F1-model_v4 | 1 | 378 | 1 | 296 | 0.7519 |
0.8607 |
| AF-C7MRC4-F1-model_v4 | 3 | 378 | 1 | 306 | 0.7515 |
0.8468 |
| AF-A6W6C7-F1-model_v4 | 1 | 378 | 3 | 303 | 0.7511 |
0.8554 |
| AF-B0RAV5-F1-model_v4 | 1 | 377 | 10 | 304 | 0.7504 |
0.871 |
| AF-B8HD44-F1-model_v4 | 1 | 378 | 5 | 321 | 0.749 |
0.839 |