dbCAN Logo

PROTEIN: HRGMv2_0438_1_87

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0438_1_87.pdb
Genome ID:
HRGMv2_0438
Protein ID:
HRGMv2_0438_1_87

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MNGKIKVDKF   VIVAILLCMV   CNRTMRAKAY   DSFKVSVYAR   AYEVDKMKDI   HWLDSTWNVI 60
SQQLEVDKIY   LETHRDLLIV   DDATLEQAKR   FFHERGVETA   GGITYTINEA   NSFETFCYSN 120
PEHRKMVQKI   AEHTAKHFDE   FILDDFFFTS   CKSDIEIKAK   GAQSWTDYRL   KLMTEAGRDL 180
VLKPAKKVNP   RVKVIIKYPN   WYDHFQGLGF   NLEEGPQLFD   GVWTGTETRD   PAGDQHLQNY 240
LSYNIIRYFD   NLRPGYNGGG   WVDAGGLNMG   MDRYAEQLHL   TMLAKAPEII   LFAYHQLLGV 300
KLSPKQRTPW   QGMGTSFSYD   EVAAPIRLKD   GSSVEPATMA   RIAGVVLKQT   DKLIRKLGNP 360
VGIKSYKPFH   AAGDDFLQNY   LGMIGLPMDM   HPVFPEDRQV   VLLTAQAAQD   TEIVAKIKRQ 420
LQSGRDVVVT   SSLLKAIPEK   LAEIAELRCT   DLKALVNDFG   RYGQSGRDLL   IPQVRYYTND 480
AWEMVSAGRP   LTGGVSGYPI   LLRAPYATGN   LYVLTIPDDM   GNLYDFPAGA   LNEIRRIMSK 540
DVGVYLEAPS   KVGLFVYDNN   TLVVENFNDE   PVEVRIVTTD   KVMKLENLED   GTVLSPLPAE 600
PVQTRRPVTP   KNSFRLLLLP   HSYKAFQYK 629
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H3GP41-F1-model_v4 28 629 10 685 0.6593 0.7307
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A4R3KSV2 GH0 10 629 13 670 0.7099 0.7577
AF-A0A3S6Z2K6-F1-model_v4 GH5_19 30 629 1 606 0.7054 0.7411
AF-A0A6B8RN37-F1-model_v4 GH0 26 629 1 644 0.7021 0.7545
AF-A0A344TLE9-F1-model_v4 GH0 14 629 10 661 0.7018 0.7497
AF-A0A6B9Z1F4-F1-model_v4 GH164 31 629 10 652 0.7003 0.7622
AF-A0A3G3GWV3-F1-model_v4 GH0 15 629 10 661 0.7002 0.7488
A0A243ALH0 GH5_19 33 629 1 592 0.6982 0.7432
AF-A0A5B9W165-F1-model_v4 GH0 19 629 17 666 0.6956 0.7515
AF-A0A7S7NNT4-F1-model_v4 GH0 16 629 20 665 0.6938 0.745
UFJ42442.1 GH5_19 33 629 1 594 0.6928 0.7304
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A3S6Z2K6 GH5_19 30 629 1 606 0.7054 0.7411
I9SUA3 GH164 22 629 12 672 0.7048 0.7661
A0A6B9Z1F4 GH164 31 629 10 652 0.7003 0.7622
A0A243ALH0 GH5_19 33 629 1 592 0.6982 0.7432
A0A0X8JBR5 GH164 23 629 1 651 0.698 0.7503
UFJ42442.1 GH5_19 33 629 1 594 0.6928 0.7304
A0A3R6Z640 GH151 21 629 32 679 0.6922 0.7553
F7KET0 GH151 28 629 5 679 0.691 0.7624
B7B5K3 GH164 31 629 31 672 0.6906 0.7614
A0A2S0LHX0 GH164 16 629 37 688 0.6906 0.7524
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6t75-assembly2.cif.gz_EEE 31 629 8 642 0.71 0.7668
6t6g-assembly2.cif.gz_EEE 31 629 8 650 0.7097 0.7706
6t75-assembly1.cif.gz_BBB 30 629 7 648 0.7096 0.7681
6t7g-assembly2.cif.gz_EEE 31 629 8 648 0.709 0.7689
6t7g-assembly2.cif.gz_DDD 13 629 1 658 0.7082 0.7529
7omi-assembly2.cif.gz_FFF 31 629 8 650 0.7081 0.7689
6t7g-assembly1.cif.gz_CCC 23 629 3 654 0.7078 0.7614
7oms-assembly2.cif.gz_DDD 20 629 1 650 0.7072 0.7554
7omi-assembly2.cif.gz_BBB 16 629 1 658 0.7068 0.7547
6t6g-assembly2.cif.gz_DDD 16 629 1 655 0.7066 0.7529
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P22795-F1-model_v4 30 629 1 590 0.8189 0.8548
AF-D9SM34-F1-model_v4 33 629 1 659 0.6742 0.7389
AF-C8WV58-F1-model_v4 30 629 11 684 0.6697 0.745
AF-D5JGG0-F1-model_v4 30 629 5 664 0.6655 0.729
AF-D4QFE7-F1-model_v4 23 628 13 689 0.6651 0.7329
AF-Q65KX8-F1-model_v4 28 629 1 661 0.665 0.7266
AF-Q93GI5-F1-model_v4 23 628 12 691 0.665 0.734
AF-Q9RFN0-F1-model_v4 30 629 4 668 0.6621 0.7275
AF-Q9KI47-F1-model_v4 28 629 4 677 0.6617 0.7288
AF-Q09HN2-F1-model_v4 28 629 4 676 0.6608 0.7276
Download Full SwissProt Results