PROTEIN: HRGMv2_0415_23_20
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Protein File & Metadata
Source:
HRGMv2_0415_23_20.pdb
Genome ID:
Protein ID:
HRGMv2_0415_23_20
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Protein Sequence
MINTSYLNQM INGLDKWLQS IQFCYMECNY VPEKLLTNNH HLNIILRTFF RLFPINIRGD 60 KKGDTYPLTP QANVALLKAY NLSKNKKVIQ ILLKRIRKLR STKTKHFALK QGIKISISLY 120 ENDKDDPTPL NTVWFGQFLL EEQTGIFSKQ NKKKLLLSIS DYLIEELGYN DHYSEGVYFY 180 YGPTLKKEIY NASALISAFL LRVGHLYDIQ LYKTLGERGI QYIVNKQNDD GSWFYASPPE 240 RKSIDCFHQS YILQALCIAK DYLPFDISIS IEKGTRYYRQ SLFKMRGDLI IPIRYDKRYL 300 PRNTWLFQSV DGRDIAEALV FFSKYSYDET MINGLLSYLH KEFYDKKTGA FASEILIWGK 360 NKIPYIEFQA WFLYSLETVS SYIKKDTV 388
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1D8PJF0-F1-model_v4 | 2 | 385 | 5 | 401 | 0.7011 |
0.7401 |
| AF-B0S6K7-F1-model_v4 | 1 | 388 | 5 | 400 | 0.6992 |
0.7346 |
| AF-C0NBR6-F1-model_v4 | 1 | 384 | 11 | 382 | 0.6952 |
0.7385 |
| AF-C1H4M4-F1-model_v4 | 2 | 384 | 16 | 384 | 0.688 |
0.7383 |
| AF-Q59XS8-F1-model_v4 | 1 | 384 | 37 | 412 | 0.687 |
0.7449 |
| AF-P51606-F1-model_v4 | 1 | 388 | 17 | 409 | 0.6824 |
0.7347 |
| AF-P82343-F1-model_v4 | 1 | 388 | 18 | 413 | 0.6797 |
0.7337 |
| AF-P51607-F1-model_v4 | 1 | 388 | 18 | 413 | 0.6797 |
0.734 |
| AF-P32140-F1-model_v4 | 1 | 388 | 2 | 413 | 0.6756 |
0.72 |
| AF-A0A175W9U6-F1-model_v4 | 2 | 384 | 25 | 393 | 0.675 |
0.7329 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Q2HN47-F1-model_v4 | GH76 | 1 | 388 | 8 | 359 | 0.7462 |
0.808 |
| AF-A0A386HNT8-F1-model_v4 | GH76 | 3 | 384 | 42 | 399 | 0.7455 |
0.8306 |
| AF-A0A1W6EBY8-F1-model_v4 | GH76 | 1 | 384 | 38 | 403 | 0.7449 |
0.8172 |
| AF-A0A7S9L2B9-F1-model_v4 | GH76 | 1 | 383 | 40 | 401 | 0.7447 |
0.8233 |
| AF-I0KBV6-F1-model_v4 | GH76 | 1 | 384 | 35 | 404 | 0.7442 |
0.8088 |
| AF-A0A6I4HZL1-F1-model_v4 | GH76 | 3 | 384 | 44 | 402 | 0.741 |
0.8268 |
| A0A4Q7MQQ1 | GH76 | 1 | 387 | 19 | 360 | 0.7392 |
0.8227 |
| AF-A0A223NX49-F1-model_v4 | GH76 | 1 | 386 | 20 | 359 | 0.7359 |
0.8216 |
| AF-A0A6I4HWN7-F1-model_v4 | GH76 | 1 | 384 | 46 | 411 | 0.7349 |
0.8133 |
| AF-A0A5B8UVH7-F1-model_v4 | GH76 | 3 | 387 | 22 | 360 | 0.7342 |
0.8228 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A858RQI1 | GH76 | 1 | 388 | 13 | 364 | 0.7408 |
0.8151 |
| A0A068NWE0 | GH76 | 1 | 385 | 12 | 360 | 0.7406 |
0.8088 |
| A0A4Q7MQQ1 | GH76 | 1 | 387 | 19 | 360 | 0.7392 |
0.8227 |
| A0A6I4HWN7 | GH76 | 1 | 384 | 46 | 411 | 0.7349 |
0.8133 |
| W0F1F9 | GH76 | 1 | 387 | 23 | 362 | 0.7335 |
0.8225 |
| A0A518ART4 | GH76 | 1 | 385 | 35 | 387 | 0.7298 |
0.8153 |
| D2S266 | GH105 | 3 | 387 | 3 | 349 | 0.7293 |
0.7914 |
| A0A3T2KGU8 | GH76 | 5 | 384 | 1 | 342 | 0.7291 |
0.793 |
| A0A1W6LJG0 | GH76 | 1 | 388 | 22 | 376 | 0.729 |
0.8007 |
| A0A416HUP6 | GH76 | 4 | 387 | 1 | 339 | 0.7262 |
0.7925 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4v1s-assembly1.cif.gz_A | 1 | 387 | 2 | 359 | 0.7457 |
0.7942 |
| 5zhb-assembly1.cif.gz_A | 1 | 385 | 1 | 380 | 0.7433 |
0.7711 |
| 5zhb-assembly2.cif.gz_B | 1 | 385 | 1 | 379 | 0.7419 |
0.7709 |
| 3ren-assembly2.cif.gz_B | 3 | 383 | 2 | 332 | 0.7406 |
0.8161 |
| 3ren-assembly1.cif.gz_A | 1 | 383 | 1 | 337 | 0.7378 |
0.8057 |
| 4mu9-assembly1.cif.gz_A | 1 | 383 | 1 | 360 | 0.7342 |
0.7799 |
| 3k7x-assembly1.cif.gz_A | 5 | 388 | 1 | 346 | 0.7292 |
0.7915 |
| 3wkf-assembly1.cif.gz_A | 1 | 388 | 9 | 405 | 0.7282 |
0.7651 |
| 4c1s-assembly2.cif.gz_B | 4 | 387 | 1 | 375 | 0.7275 |
0.7597 |
| 7d5g-assembly1.cif.gz_A | 1 | 384 | 2 | 389 | 0.7272 |
0.7552 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5LH66-F1-model_v4 | 1 | 385 | 1 | 392 | 0.7292 |
0.7584 |
| AF-E6UB41-F1-model_v4 | 1 | 387 | 1 | 389 | 0.7251 |
0.7488 |
| AF-P29954-F1-model_v4 | 1 | 387 | 4 | 387 | 0.7247 |
0.754 |
| AF-P0DKY4-F1-model_v4 | 1 | 387 | 1 | 389 | 0.7246 |
0.7484 |
| AF-F8WRK9-F1-model_v4 | 1 | 388 | 11 | 410 | 0.7239 |
0.7644 |
| AF-B8DZK4-F1-model_v4 | 1 | 384 | 2 | 389 | 0.7199 |
0.7488 |
| AF-P17560-F1-model_v4 | 1 | 388 | 7 | 402 | 0.6987 |
0.7334 |
| AF-P51606-F1-model_v4 | 1 | 388 | 17 | 409 | 0.6824 |
0.7347 |
| AF-P51607-F1-model_v4 | 1 | 388 | 18 | 413 | 0.6797 |
0.734 |
| AF-P82343-F1-model_v4 | 1 | 388 | 18 | 413 | 0.6797 |
0.7337 |