PROTEIN: HRGMv2_0413_20_15
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0413_20_15.pdb
Genome ID:
Protein ID:
HRGMv2_0413_20_15
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNIVTLNIPG LDWQTGVLAK QIVNDHPAPF RVILAVKKGG SFVARSFLKS YPAELVEFFG 60 EVDLHRPSTK YKKGTLVRML PHVPLWILNS MRRTEATWLK MKQHLREPRV PHLDLEPEIA 120 DRLRDGVPEV LLIDDAVDSG TTARGVIDAV LRINPKARVK VMAITVTTDS PLVMADYYTY 180 NNGTLVRFPW SKDYKNR 197
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P8N9-F1-model_v4 | 3 | 193 | 1 | 145 | 0.7171 |
0.8567 |
| AF-K0EWC8-F1-model_v4 | 1 | 194 | 2 | 152 | 0.6971 |
0.8447 |
| AF-C1GSG2-F1-model_v4 | 1 | 197 | 2 | 197 | 0.6523 |
0.6929 |
| AF-C0NYQ7-F1-model_v4 | 1 | 197 | 2 | 196 | 0.6521 |
0.695 |
| AF-A0A175VQH6-F1-model_v4 | 1 | 197 | 2 | 197 | 0.6487 |
0.6921 |
| AF-O13917-F1-model_v4 | 1 | 197 | 3 | 196 | 0.6461 |
0.6941 |
| AF-U7PRE4-F1-model_v4 | 1 | 197 | 2 | 199 | 0.6398 |
0.6833 |
| AF-A0A3Q0KPJ1-F1-model_v4 | 1 | 197 | 15 | 213 | 0.6052 |
0.6703 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1vdm-assembly1.cif.gz_D | 1 | 195 | 1 | 144 | 0.7119 |
0.8551 |
| 1vdm-assembly1.cif.gz_J | 1 | 195 | 1 | 144 | 0.71 |
0.8524 |
| 1vdm-assembly1.cif.gz_L | 1 | 195 | 1 | 145 | 0.7068 |
0.8494 |
| 1vdm-assembly1.cif.gz_C | 2 | 194 | 2 | 139 | 0.7063 |
0.8699 |
| 1vdm-assembly1.cif.gz_H | 1 | 195 | 1 | 145 | 0.7057 |
0.8481 |
| 4zfn-assembly1.cif.gz_A-2 | 2 | 197 | 1 | 157 | 0.6869 |
0.825 |
| 5bqp-assembly1.cif.gz_B | 1 | 197 | 2 | 153 | 0.6841 |
0.8315 |
| 5bqo-assembly1.cif.gz_B | 1 | 197 | 1 | 162 | 0.6789 |
0.8019 |
| 4ts7-assembly1.cif.gz_A | 1 | 197 | 3 | 194 | 0.6217 |
0.6788 |
| 4rad-assembly2.cif.gz_E | 1 | 197 | 9 | 194 | 0.6154 |
0.6883 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O13917-F1-model_v4 | 1 | 197 | 3 | 196 | 0.6461 |
0.6941 |
| AF-Q9W719-F1-model_v4 | 1 | 197 | 12 | 206 | 0.6104 |
0.6711 |