PROTEIN: HRGMv2_0409_3_26
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Protein File & Metadata
Source:
HRGMv2_0409_3_26.pdb
Genome ID:
Protein ID:
HRGMv2_0409_3_26
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Protein Sequence
MQTTSPEEVA TARRIMVWKD FVPDILRFPL MLLIIIIFML SGGIYMSAVS EISGSFSWIK 60 EDILMAGYAS MTGLTMAFPL LFRILFRFPT RSILLVSAVA FIVCDYVCMV CQYLPLVVLM 120 SFISGFFRIL STFVCWSNLQ LRITPNRDFA VFFPFLFTFI LGSVQLTDIV TGYSISAFEW 180 RAMHRLTIGA FILVFALVYF CMRRGYRQAP YIPFKGIDYL GGILWSLWLI CIIFILVYGE 240 HYDWLDSEEI RTAIVFAVIL LVMCLERAAS IRHPYISLKT FSQRNMLFIF ILFGCMSLMS 300 TMVSSVQNIY TSMILGFDAR HNADLCWGVV AGIALGAIFF FIALKKWKWQ IKSIVFMGFV 360 LFLLYQIQLY FLIDASTEKY MLYLPMVCKG AGVSIVYTSL TYALAGSVTF AYYFEAMCVI 420 GFIRTSFGGP LNSAIITHML NHIKQAATAD LGSYIDSMHP MSDSFTAIYN EFQRQMIMVS 480 LKEIYGYAAI AAILILLAIL ASDYRQYISS RINRMWKLTQ IWRHLRNQTS SMS 533
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-G3XD81-F1-model_v4 | 4 | 517 | 1 | 505 | 0.8321 |
0.8737 |
| AF-Q5F680-F1-model_v4 | 8 | 517 | 1 | 507 | 0.8264 |
0.8609 |
| AF-Q32DH7-F1-model_v4 | 8 | 517 | 6 | 512 | 0.8236 |
0.8645 |
| AF-P0AEJ0-F1-model_v4 | 8 | 516 | 2 | 508 | 0.8148 |
0.8565 |
| AF-P52600-F1-model_v4 | 12 | 515 | 7 | 511 | 0.8102 |
0.8568 |
| AF-P44927-F1-model_v4 | 12 | 514 | 7 | 510 | 0.8075 |
0.8543 |
| AF-A0A0H3GNL5-F1-model_v4 | 8 | 512 | 9 | 520 | 0.8025 |
0.851 |
| AF-A0A0H3GSP9-F1-model_v4 | 4 | 510 | 15 | 538 | 0.8014 |
0.8677 |
| AF-A0A0H3GU91-F1-model_v4 | 2 | 520 | 2 | 509 | 0.8007 |
0.8415 |
| AF-Q8ZMK8-F1-model_v4 | 4 | 517 | 3 | 508 | 0.7995 |
0.8433 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 7 | 512 | 8 | 535 | 0.7266 |
0.798 |
| AF-A2S189-F1-model_v4 | GH3 | 2 | 513 | 1 | 414 | 0.6602 |
0.7624 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 7 | 527 | 16 | 479 | 0.6575 |
0.7398 |
| ARF89445.1 | GT1 | 1 | 511 | 63 | 953 | 0.6472 |
0.8693 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 12 | 523 | 30 | 678 | 0.6051 |
0.8132 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 2 | 531 | 1 | 762 | 0.5703 |
0.6889 |
| A0A3C1RID2 | GH17 | 1 | 533 | 1 | 735 | 0.5657 |
0.6821 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 1 | 523 | 4 | 475 | 0.5635 |
0.7555 |
| AF-A0A1Y0M8J3-F1-model_v4 | GH17 | 1 | 525 | 2 | 474 | 0.56 |
0.7477 |
| AF-W8VNY0-F1-model_v4 | GH17 | 1 | 524 | 1 | 471 | 0.5596 |
0.7492 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 7 | 512 | 8 | 535 | 0.7266 |
0.798 |
| A2S189 | GH3 | 2 | 513 | 1 | 414 | 0.6602 |
0.7624 |
| ARF89445.1 | GT1 | 1 | 511 | 63 | 953 | 0.6472 |
0.8693 |
| WBC00074.1 | CBM42 , GH2 | 1 | 515 | 2 | 493 | 0.6189 |
0.6776 |
| A0A387HHJ8 | GT1 | 12 | 523 | 30 | 678 | 0.6051 |
0.8132 |
| A0A3C1RID2 | GH17 | 1 | 533 | 1 | 735 | 0.5657 |
0.6821 |
| A0A7H8RF34 | CBM24 | 2 | 516 | 301 | 761 | 0.5487 |
0.7517 |
| A0A918L8E6 | GT2 | 13 | 516 | 1 | 440 | 0.536 |
0.7223 |
| S5VEU6 | CE14 | 5 | 533 | 12 | 680 | 0.5313 |
0.6508 |
| A0A9Q9RZ67 | GH78 | 7 | 520 | 742 | 1453 | 0.5285 |
0.8054 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 9 | 509 | 1 | 483 | 0.7633 |
0.8188 |
| 7y58-assembly1.cif.gz_A | 8 | 515 | 6 | 510 | 0.76 |
0.8032 |
| 8pnl-assembly2.cif.gz_C | 9 | 509 | 1 | 486 | 0.7536 |
0.8069 |
| 7d5p-assembly2.cif.gz_B | 27 | 509 | 1 | 413 | 0.7162 |
0.8224 |
| 7d5p-assembly1.cif.gz_A | 13 | 508 | 1 | 408 | 0.7148 |
0.8245 |
| 7d5q-assembly2.cif.gz_B | 15 | 509 | 1 | 411 | 0.7134 |
0.8209 |
| 7d5q-assembly1.cif.gz_A | 15 | 508 | 1 | 403 | 0.7076 |
0.8206 |
| 8b1j-assembly1.cif.gz_A | 10 | 511 | 1 | 451 | 0.7048 |
0.7808 |
| 8ex5-assembly1.cif.gz_A | 13 | 523 | 1 | 414 | 0.6948 |
0.7989 |
| 7yr5-assembly1.cif.gz_A | 11 | 509 | 1 | 382 | 0.6937 |
0.8252 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 8 | 517 | 2 | 507 | 0.8259 |
0.8636 |
| AF-P0DPR7-F1-model_v4 | 1 | 511 | 1 | 512 | 0.8184 |
0.8523 |
| AF-P0AEJ1-F1-model_v4 | 8 | 516 | 2 | 508 | 0.8165 |
0.8582 |
| AF-P0AEJ0-F1-model_v4 | 8 | 516 | 2 | 508 | 0.8148 |
0.8565 |
| AF-P52600-F1-model_v4 | 12 | 515 | 7 | 511 | 0.8102 |
0.8568 |
| AF-P44927-F1-model_v4 | 12 | 514 | 7 | 510 | 0.8075 |
0.8543 |
| AF-P32369-F1-model_v4 | 1 | 513 | 1 | 475 | 0.7916 |
0.8571 |
| AF-P96712-F1-model_v4 | 10 | 521 | 2 | 511 | 0.7802 |
0.8159 |
| AF-O35018-F1-model_v4 | 4 | 516 | 7 | 479 | 0.7795 |
0.8484 |
| AF-P94422-F1-model_v4 | 4 | 519 | 4 | 471 | 0.7784 |
0.85 |