PROTEIN: HRGMv2_0342_6_102
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Protein File & Metadata
Source:
HRGMv2_0342_6_102.pdb
Genome ID:
Protein ID:
HRGMv2_0342_6_102
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Protein Sequence
MTRNRYNNRR IARNSMLLYC RSVVTLVISL YTSRIVLEAL GFEDFGVYAV VGSTVTMFSL 60 FSTTFISSTQ RFINIAMARD GIDELSRIFT ASIKLHRLLA AGIFILFETL GLWIVNTKLN 120 FPPEDMTAVH IVYQLSVVTF LFNVLSVPYN AVITAKERMG LFAAVNIAES IVKLGVAVAL 180 MHTSSNRLIF YAAMLTTLSV AVRIFYGIYC RCHFNECRMV KITDKRIYRE ILGISGWNFL 240 GSSSSIITIE GIGIVLNLFF NVLMNAAKGL ASQIENVVRS LVENLMMSIR PQLTRSYASG 300 DTAFFNSLVS RGTRFGTYLT LLLCLPLLFR TYTLLSLWLK SVPPYTVPFV RIIMIYILIM 360 PASSVLDTVT LASGRIKGSQ ITLSLLQLSN LPLMCLALYA GLPPYCVYLP FIVTGYTALY 420 VRLKYAIVNS TITMKSYMAD TFSPIIHVTL CSLPLPLVMQ MWLFDADTIA NTFIMCVILT 480 LSLSASVYLF GITREERNVI LNHIRKQPRP 510
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 3 | 509 | 1 | 507 | 0.8725 |
0.8913 |
| AF-A0A0H3GSJ3-F1-model_v4 | 6 | 508 | 1 | 478 | 0.8648 |
0.9081 |
| AF-Q8DPI1-F1-model_v4 | 6 | 507 | 1 | 488 | 0.8625 |
0.9008 |
| AF-Q2G262-F1-model_v4 | 3 | 508 | 1 | 476 | 0.8568 |
0.901 |
| AF-H9L497-F1-model_v4 | 3 | 510 | 1 | 492 | 0.8541 |
0.8862 |
| AF-P77377-F1-model_v4 | 3 | 510 | 1 | 492 | 0.8446 |
0.8776 |
| AF-P37169-F1-model_v4 | 1 | 509 | 6 | 524 | 0.8349 |
0.8655 |
| AF-Q32ET1-F1-model_v4 | 7 | 509 | 1 | 511 | 0.8298 |
0.86 |
| AF-P0AF16-F1-model_v4 | 7 | 509 | 1 | 511 | 0.8272 |
0.8576 |
| AF-P37746-F1-model_v4 | 4 | 436 | 1 | 415 | 0.8224 |
0.918 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 2 | 503 | 1 | 505 | 0.8522 |
0.8851 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 508 | 33 | 544 | 0.8155 |
0.8616 |
| QNU38870.1 | GT4 | 8 | 509 | 1 | 478 | 0.7663 |
0.8952 |
| QJC17489.1 | GT2 | 1 | 506 | 215 | 842 | 0.7158 |
0.9061 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 6 | 510 | 1 | 597 | 0.6833 |
0.8866 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 510 | 1 | 595 | 0.68 |
0.8557 |
| AF-D1BIF1-F1-model_v4 | GT4 | 6 | 510 | 7 | 630 | 0.6757 |
0.8958 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 509 | 2 | 498 | 0.6637 |
0.8648 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 510 | 19 | 521 | 0.6634 |
0.847 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 11 | 510 | 1 | 831 | 0.6632 |
0.8454 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 2 | 503 | 1 | 505 | 0.8522 |
0.8851 |
| A0A160T2N7 | GT28 | 1 | 508 | 33 | 544 | 0.8155 |
0.8616 |
| QNU38870.1 | GT4 | 8 | 509 | 1 | 478 | 0.7663 |
0.8952 |
| QJC17489.1 | GT2 | 1 | 506 | 215 | 842 | 0.7158 |
0.9061 |
| A0A3Q9G719 | GT4 | 6 | 510 | 1 | 597 | 0.6833 |
0.8866 |
| A0A3T0RPT8 | GT4 | 1 | 510 | 1 | 595 | 0.68 |
0.8557 |
| D1BIF1 | GT4 | 6 | 510 | 7 | 630 | 0.6757 |
0.8958 |
| A0A517Z2I8 | GT2 | 1 | 509 | 2 | 498 | 0.6637 |
0.8648 |
| F9ZKY1 | GT2 | 1 | 510 | 19 | 521 | 0.6634 |
0.847 |
| A0A2U8PPB3 | GT4 | 11 | 510 | 1 | 831 | 0.6632 |
0.8454 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 17 | 500 | 1 | 496 | 0.8261 |
0.8745 |
| 6nc6-assembly2.cif.gz_B | 13 | 498 | 1 | 461 | 0.8098 |
0.8671 |
| 7wag-assembly1.cif.gz_A | 8 | 500 | 1 | 509 | 0.7939 |
0.8492 |
| 6cc4-assembly1.cif.gz_A | 1 | 504 | 40 | 608 | 0.7743 |
0.8645 |
| 6fhz-assembly1.cif.gz_A | 11 | 434 | 8 | 436 | 0.7676 |
0.8681 |
| 3vvs-assembly1.cif.gz_A | 3 | 432 | 3 | 440 | 0.66 |
0.7482 |
| 7dqk-assembly1.cif.gz_A | 1 | 432 | 1 | 457 | 0.6335 |
0.7354 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 9 | 507 | 1 | 499 | 0.8898 |
0.9192 |
| AF-Q58467-F1-model_v4 | 3 | 509 | 1 | 507 | 0.8725 |
0.8913 |
| AF-Q48457-F1-model_v4 | 3 | 508 | 1 | 483 | 0.8544 |
0.8961 |
| AF-O34238-F1-model_v4 | 2 | 510 | 1 | 525 | 0.8469 |
0.8767 |
| AF-P77377-F1-model_v4 | 3 | 510 | 1 | 492 | 0.8446 |
0.8776 |
| AF-P33699-F1-model_v4 | 3 | 509 | 3 | 486 | 0.8445 |
0.892 |
| AF-O83529-F1-model_v4 | 3 | 508 | 1 | 526 | 0.8396 |
0.8759 |
| AF-P37169-F1-model_v4 | 1 | 509 | 6 | 524 | 0.8349 |
0.8655 |
| AF-O32273-F1-model_v4 | 3 | 507 | 1 | 479 | 0.8312 |
0.8788 |
| AF-B4E9G3-F1-model_v4 | 7 | 503 | 1 | 514 | 0.8304 |
0.8732 |