PROTEIN: HRGMv2_0326_7_39
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Protein File & Metadata
Source:
HRGMv2_0326_7_39.pdb
Genome ID:
Protein ID:
HRGMv2_0326_7_39
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Protein Sequence
MEPITIREIT GRRALKKYVQ FNIDLYKNNP YKVPPLIIDE INTFIPAKNP AFEFCEAVHY 60 MAFEGKKPVG RITGIINHNL NKKTGKAEAR FGFVDFVDDT RVSDALFDAV EAWAREKGMN 120 RLVGPLGFTD MDPEGLLVEG YDQLGTMVTI YNYPYYVEHI ERRGFTPECE WVEFKLTVPP 180 TMSEKHARVA QIVRQKYHLR SIVREYTNIH KLARDYGRQI FELINEAYKN LYGYSTLTPR 240 QIDHYVKMYI PVVNLKHLSL VVNEKDELVG VGIAMPSMSR ALQKAKGRLF PFGFIHLLKA 300 LKGKNDIVDL LLVAVHPNYQ NMGANALIFD DILPNFIKDG FKYAESNPEM VTNNKVQQQW 360 QYFEQQQHKR RRAYAKDI 378
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 378 | 15 | 390 | 0.8901 |
0.9222 |
| AF-X8EWX4-F1-model_v4 | 1 | 378 | 18 | 393 | 0.8878 |
0.9233 |
| AF-P9WJM7-F1-model_v4 | 3 | 378 | 1 | 313 | 0.7171 |
0.8046 |
| AF-K0EMI4-F1-model_v4 | 1 | 378 | 11 | 314 | 0.6914 |
0.802 |
| AF-Q54G61-F1-model_v4 | 3 | 378 | 1 | 307 | 0.663 |
0.7545 |
| AF-A0A0H3GIP5-F1-model_v4 | 2 | 378 | 1 | 274 | 0.6574 |
0.7868 |
| AF-Q54DW0-F1-model_v4 | 3 | 378 | 1 | 321 | 0.657 |
0.7335 |
| AF-K0EYT8-F1-model_v4 | 1 | 377 | 10 | 259 | 0.6325 |
0.7913 |
| AF-Q54LZ9-F1-model_v4 | 1 | 378 | 6 | 307 | 0.6088 |
0.7052 |
| AF-Q9NAR1-F1-model_v4 | 1 | 377 | 35 | 332 | 0.6087 |
0.7557 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 378 | 16 | 339 | 0.7534 |
0.8464 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 378 | 410 | 739 | 0.4924 |
0.7402 |
| AF-A0A1D9PUT2-F1-model_v4 | GH3 | 1 | 378 | 581 | 967 | 0.4809 |
0.6972 |
| A0A7C8H9M3 | GH3 | 1 | 376 | 550 | 877 | 0.4781 |
0.7624 |
| AF-A0A146FCW8-F1-model_v4 | GH3 | 1 | 378 | 530 | 859 | 0.4776 |
0.7518 |
| UPL03096.1 | GH3 | 1 | 378 | 249 | 965 | 0.4774 |
0.6914 |
| AF-A0A384J7C8-F1-model_v4 | GH3 | 1 | 378 | 583 | 955 | 0.4757 |
0.6953 |
| AF-A2QDM1-F1-model_v4 | GH3 | 1 | 378 | 530 | 859 | 0.4755 |
0.7476 |
| AF-A0A7U2MF49-F1-model_v4 | GH3 | 1 | 378 | 73 | 833 | 0.4742 |
0.6576 |
| AF-A0A7R7ZLS0-F1-model_v4 | GH3 | 1 | 376 | 536 | 854 | 0.4719 |
0.7648 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 378 | 16 | 339 | 0.7534 |
0.8464 |
| A0A7C8H9M3 | GH3 | 1 | 376 | 550 | 877 | 0.4781 |
0.7624 |
| UPL03096.1 | GH3 | 1 | 378 | 249 | 965 | 0.4774 |
0.6914 |
| A0A7U2MF49 | GH3 | 1 | 378 | 73 | 833 | 0.4742 |
0.6576 |
| V9M3A9 | GH3 | 1 | 376 | 536 | 858 | 0.4651 |
0.7454 |
| A0A161HFD8 | GH3 | 1 | 378 | 570 | 967 | 0.4605 |
0.6669 |
| A0A7H8QUW2 | GH3 | 1 | 378 | 206 | 946 | 0.4602 |
0.6625 |
| Q6MFP1 | GH3 | 1 | 378 | 582 | 1081 | 0.4595 |
0.6854 |
| G1XST4 | GH3 | 1 | 378 | 606 | 1002 | 0.4592 |
0.6708 |
| A0A2V1AHZ9 | GH3 | 1 | 378 | 235 | 987 | 0.4572 |
0.6671 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7q3a-assembly1.cif.gz_A | 1 | 378 | 18 | 339 | 0.7295 |
0.8265 |
| 5kgh-assembly1.cif.gz_A | 4 | 378 | 1 | 315 | 0.7261 |
0.8136 |
| 7q3a-assembly2.cif.gz_B | 1 | 378 | 17 | 340 | 0.7246 |
0.8179 |
| 5kga-assembly1.cif.gz_B | 4 | 378 | 1 | 315 | 0.7227 |
0.8095 |
| 5kf2-assembly1.cif.gz_A | 4 | 378 | 1 | 315 | 0.7226 |
0.8107 |
| 2c27-assembly1.cif.gz_A | 6 | 377 | 1 | 301 | 0.7208 |
0.8201 |
| 5kgh-assembly1.cif.gz_B | 4 | 378 | 1 | 312 | 0.7201 |
0.8099 |
| 5kf1-assembly1.cif.gz_B | 4 | 378 | 1 | 311 | 0.7181 |
0.809 |
| 1p0h-assembly1.cif.gz_A | 4 | 376 | 1 | 290 | 0.6982 |
0.81 |
| 2wpw-assembly4.cif.gz_D | 3 | 378 | 1 | 321 | 0.6825 |
0.7625 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 378 | 15 | 390 | 0.8901 |
0.9222 |
| AF-D3Q4A8-F1-model_v4 | 3 | 378 | 1 | 306 | 0.7607 |
0.8573 |
| AF-C7QKH8-F1-model_v4 | 1 | 376 | 1 | 314 | 0.749 |
0.8362 |
| AF-Q5EDG0-F1-model_v4 | 3 | 376 | 1 | 301 | 0.7484 |
0.85 |
| AF-D2S4P5-F1-model_v4 | 1 | 378 | 1 | 308 | 0.7484 |
0.8426 |
| AF-C6WPR7-F1-model_v4 | 3 | 376 | 1 | 297 | 0.748 |
0.8553 |
| AF-B8HD44-F1-model_v4 | 1 | 378 | 3 | 321 | 0.7466 |
0.8317 |
| AF-D1A4F4-F1-model_v4 | 1 | 378 | 1 | 296 | 0.7465 |
0.8552 |
| AF-B0RAV5-F1-model_v4 | 1 | 377 | 10 | 304 | 0.7458 |
0.866 |
| AF-A6W6C7-F1-model_v4 | 2 | 378 | 3 | 303 | 0.7458 |
0.8498 |