PROTEIN: HRGMv2_0325_4_12
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Protein File & Metadata
Source:
HRGMv2_0325_4_12.pdb
Genome ID:
Protein ID:
HRGMv2_0325_4_12
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Protein Sequence
MEIRKATLSD MPTLMRIFDS ARAFMRATGN PTQWVDGYPS EEQVRRDVEN GHCYCVVDAS 60 SGVVATFCLI PGEDPNYRRI DHGRWLDDRP YATIHRLASD GSVRGVAEAC FDWCLSRYDN 120 LRADTHADNK ILQHILAKYD FAYCGIVHVA NGTERLAFQR RSAGVSPR 168
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CYK9-F1-model_v4 | 1 | 163 | 1 | 164 | 0.8973 |
0.9328 |
| AF-A0A132PA73-F1-model_v4 | 1 | 164 | 1 | 170 | 0.8626 |
0.9116 |
| AF-Q0P7R6-F1-model_v4 | 1 | 168 | 4 | 176 | 0.8465 |
0.8884 |
| AF-Q2FYL4-F1-model_v4 | 2 | 164 | 1 | 169 | 0.8401 |
0.8925 |
| AF-K0F5F1-F1-model_v4 | 3 | 168 | 1 | 169 | 0.7844 |
0.8266 |
| AF-K0F3Q7-F1-model_v4 | 1 | 164 | 11 | 172 | 0.7413 |
0.8052 |
| AF-K0EZR6-F1-model_v4 | 1 | 164 | 1 | 177 | 0.7334 |
0.7946 |
| AF-Q2G1V1-F1-model_v4 | 1 | 166 | 4 | 168 | 0.7192 |
0.7803 |
| AF-K0F4U8-F1-model_v4 | 1 | 168 | 14 | 201 | 0.7099 |
0.8143 |
| AF-O74311-F1-model_v4 | 1 | 163 | 3 | 150 | 0.7069 |
0.7884 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QQP97041.1 | GH108 | 1 | 162 | 207 | 359 | 0.5229 |
0.7888 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2pc1-assembly1.cif.gz_A | 1 | 165 | 7 | 173 | 0.8699 |
0.9184 |
| 2fia-assembly1.cif.gz_A | 1 | 164 | 1 | 157 | 0.8104 |
0.8593 |
| 8osp-assembly2.cif.gz_C | 1 | 162 | 6 | 174 | 0.7375 |
0.8089 |
| 2oh1-assembly3.cif.gz_C | 1 | 162 | 10 | 172 | 0.737 |
0.8064 |
| 5icw-assembly3.cif.gz_C-3 | 1 | 164 | 11 | 176 | 0.7091 |
0.7707 |
| 4r3k-assembly1.cif.gz_A | 1 | 162 | 3 | 157 | 0.7035 |
0.7681 |
| 6ag4-assembly1.cif.gz_A | 1 | 162 | 3 | 157 | 0.7016 |
0.7665 |
| 6ag5-assembly1.cif.gz_A | 1 | 162 | 3 | 157 | 0.6978 |
0.7628 |
| 7mx2-assembly1.cif.gz_A | 1 | 163 | 4 | 152 | 0.6948 |
0.776 |
| 6c9m-assembly2.cif.gz_D | 1 | 168 | 2 | 159 | 0.6843 |
0.7465 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O31513-F1-model_v4 | 1 | 166 | 15 | 180 | 0.7658 |
0.8281 |
| AF-O74311-F1-model_v4 | 1 | 163 | 3 | 150 | 0.7069 |
0.7884 |
| AF-O32075-F1-model_v4 | 1 | 165 | 2 | 166 | 0.7044 |
0.7607 |
| AF-Q9QXS4-F1-model_v4 | 1 | 168 | 4 | 226 | 0.6637 |
0.7856 |
| AF-O61219-F1-model_v4 | 1 | 168 | 2 | 165 | 0.6543 |
0.7267 |
| AF-Q9UTI3-F1-model_v4 | 1 | 168 | 2 | 159 | 0.6531 |
0.7417 |
| AF-Q54MP9-F1-model_v4 | 1 | 164 | 32 | 180 | 0.6517 |
0.7908 |
| AF-Q9BSU3-F1-model_v4 | 1 | 168 | 2 | 162 | 0.5995 |
0.7409 |
| AF-P41227-F1-model_v4 | 1 | 168 | 2 | 159 | 0.5872 |
0.7452 |