PROTEIN: HRGMv2_0310_14_56
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Protein File & Metadata
Source:
HRGMv2_0310_14_56.pdb
Genome ID:
Protein ID:
HRGMv2_0310_14_56
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Protein Sequence
MQKITLIAAA ALAALGASAQ YTCDPTVETV LAKGKVSQVM PIALDEGALA KFEAQGANVT 60 SAAPNDADNN LWVWDNTLQA GDATNPGVGD HFDGYASFTV GTVGWSGAGY NCTALNTEWW 120 NADTRFHIAY MSPGTAPASI AIIVADGGDM GSQPAKVALG DAFNDNGAVF PAVGPKAGDD 180 WQGIDISFSD LKKLYPTFDW KAVKEWKGNI MSFLAGGVTG QAFAFDAIYY YQLGDGSGIN 240 GISADEAEWV VTANTVNVAG ANGIELYNLG GQLVKKTAGT TLGLSNLAKG VYVAKSGNQA 300 KKIVVK 306
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2S1JV49-F1-model_v4 | CBM32 , GH16_3 | 36 | 299 | 460 | 778 | 0.3925 |
0.6723 |
| AF-A0A2S1JV37-F1-model_v4 | GH16_3 | 36 | 278 | 464 | 676 | 0.3825 |
0.7369 |
| AF-D0LSQ5-F1-model_v4 | CBM32 , GH16_3 | 36 | 297 | 345 | 795 | 0.3738 |
0.6279 |
| AF-A0A6P1TJB4-F1-model_v4 | GH16_3 | 36 | 245 | 442 | 624 | 0.3735 |
0.8228 |
| AF-A0A510IWN9-F1-model_v4 | CBM32 , GH16_3 | 36 | 300 | 456 | 765 | 0.371 |
0.6148 |
| AF-A0A5P9EVB7-F1-model_v4 | GH16_3 | 36 | 274 | 460 | 671 | 0.3639 |
0.704 |
| AF-Q8GRB5-F1-model_v4 | GH16_3 | 36 | 242 | 460 | 634 | 0.3487 |
0.8313 |
| AF-A0A6B9ZMU5-F1-model_v4 | CBM32 , GH16_3 | 36 | 300 | 302 | 545 | 0.3382 |
0.6474 |
| A0A5J6PDC5 | CBM32 , CBM6 , GH128 , GH16_3 | 36 | 281 | 460 | 1362 | 0.3043 |
0.6178 |
| UOQ69821.1 | CBM3 , GH16_3 | 36 | 299 | 297 | 542 | 0.2983 |
0.6186 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2S1JV49 | CBM32 , GH16_3 | 36 | 299 | 460 | 778 | 0.3925 |
0.6723 |
| D0LSQ5 | CBM32 , GH16_3 | 36 | 297 | 345 | 795 | 0.3738 |
0.6279 |
| UZP73529.1 | GH17 | 36 | 233 | 455 | 622 | 0.3458 |
0.8023 |
| G0LA58 | CBM42 , CBM88 , GH16_3 | 31 | 306 | 25 | 899 | 0.3388 |
0.5583 |
| A0A5D6UTJ0 | GH16_3 | 36 | 300 | 294 | 546 | 0.3368 |
0.6338 |
| I0BES0 | CBM30 | 35 | 306 | 39 | 270 | 0.3127 |
0.6446 |
| A0A5J6PDC5 | CBM32 , CBM6 , GH128 , GH16_3 | 36 | 281 | 460 | 1362 | 0.3043 |
0.6178 |
| UOQ69821.1 | CBM3 , GH16_3 | 36 | 299 | 297 | 542 | 0.2983 |
0.6186 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.