dbCAN Logo

PROTEIN: HRGMv2_0260_39_9

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0260_39_9.pdb
Genome ID:
HRGMv2_0260
Protein ID:
HRGMv2_0260_39_9

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MMKKGCKYGT   HRVISPKGVL   PQPADKLDNN   MDEIYDNEIL   IDVQTLNIDS   ASFTQIEEQA 60
KGDKAEIAKI   MMSIVEKQGK   HRNPVTGSGG   MLLGTVEKIG   DALIGKTDLK   VGDKIATLVS 120
LSLTPLRIDK   IKEIRPEIDQ   VDIDGKAILF   ESGIYAKIPT   DLPENLALSA   LDVAGAPAQT 180
AKLVKPGDTV   VIIGAGGKSG   MLCCYEAKKR   AGVTGKVIGI   CHSEKSTKRM   LDLGFCDEVF 240
AADATQPVPV   MKKIEEMTNG   QMADICINNV   NIPDTEMTSI   LVTKNTGIVY   FFSMATSFTK 300
AALGAEGVGS   DVTMLIGNGY   TKGHAEITLQ   ELRECEKLRK   IFTELYA 347
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O53146-F1-model_v4 29 347 20 325 0.6719 0.756
AF-X8FES5-F1-model_v4 29 347 20 326 0.669 0.752
AF-Q4DTF4-F1-model_v4 28 347 21 326 0.6646 0.7522
AF-Q9I0F8-F1-model_v4 29 347 21 321 0.6621 0.7526
AF-P28304-F1-model_v4 29 347 21 324 0.6612 0.7475
AF-P40783-F1-model_v4 29 347 21 324 0.6602 0.7468
AF-E9AG46-F1-model_v4 29 347 20 327 0.6581 0.7395
AF-Q869N7-F1-model_v4 28 347 21 325 0.6581 0.7455
AF-Q4DHH8-F1-model_v4 29 347 20 326 0.6576 0.7428
AF-U7PZL5-F1-model_v4 29 347 18 344 0.6572 0.732
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9Q7AYV1 AA10 29 347 18 343 0.6482 0.7225
A0A6L9JGG6 GH16 28 347 18 338 0.6105 0.6779
AF-A0A7H8QGD1-F1-model_v4 GH76 29 347 33 350 0.5393 0.6739
AF-A0A094F1U7-F1-model_v4 GH135 29 347 21 369 0.5202 0.7399
AF-A0A094GJ07-F1-model_v4 GH135 29 347 21 368 0.5195 0.7384
A0A8D6ZK64 GH28 1 347 178 526 0.5107 0.6273
M5EEC9 GH43_26 1 347 249 632 0.5017 0.657
AF-A0A6M7Z926-F1-model_v4 CBM50 31 347 6 305 0.4992 0.6886
QWU87001.1 GT22 25 347 491 819 0.4613 0.6973
A0A8S2AVT3 GH1 31 347 10 362 0.4545 0.6938
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9Q7AYV1 AA10 29 347 18 343 0.6482 0.7225
A0A6L9JGG6 GH16 28 347 18 338 0.6105 0.6779
A0A7H8QGD1 GH76 29 347 33 350 0.5393 0.6739
A0A094F1U7 GH135 29 347 21 369 0.5202 0.7399
A0A8D6ZK64 GH28 1 347 178 526 0.5107 0.6273
M5EEC9 GH43_26 1 347 249 632 0.5017 0.657
A0A6M7Z926 CBM50 31 347 6 305 0.4992 0.6886
A0A1W6CNQ8 GT2 29 347 326 641 0.4708 0.6721
QWU87001.1 GT22 25 347 491 819 0.4613 0.6973
A0A8S2AVT3 GH1 31 347 10 362 0.4545 0.6938
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7dl0-assembly1.cif.gz_A 1 347 1 351 0.9003 0.9214
7dl3-assembly1.cif.gz_A 1 347 1 351 0.8401 0.8682
7dl7-assembly4.cif.gz_E 1 347 1 350 0.8377 0.8622
7dl1-assembly2.cif.gz_D 1 347 1 351 0.8368 0.8626
4rvu-assembly2.cif.gz_C 29 347 20 325 0.6684 0.7528
3jyl-assembly1.cif.gz_A 29 347 21 321 0.6681 0.7599
8j6e-assembly1.cif.gz_A 29 347 23 330 0.6633 0.7486
4rvu-assembly1.cif.gz_D 29 347 21 320 0.6583 0.7494
1qor-assembly1.cif.gz_B 29 347 20 323 0.6577 0.7437
5doz-assembly1.cif.gz_A 29 347 21 328 0.6499 0.7319
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-E3PRJ9-F1-model_v4 3 347 1 344 0.8837 0.9064
AF-Q8RHX3-F1-model_v4 2 347 1 345 0.8693 0.8922
AF-Q99W07-F1-model_v4 29 347 17 333 0.6466 0.7139
AF-Q2FJ31-F1-model_v4 29 347 17 333 0.6463 0.7136
AF-Q2G0G1-F1-model_v4 29 347 17 333 0.6463 0.7137
AF-Q5HI63-F1-model_v4 29 347 17 333 0.646 0.7134
AF-Q6GBM4-F1-model_v4 29 347 17 333 0.6458 0.7132
AF-Q6GJ63-F1-model_v4 29 347 17 333 0.6458 0.7138
AF-Q7A742-F1-model_v4 29 347 17 333 0.6456 0.7131
AF-Q8NXU1-F1-model_v4 29 347 17 333 0.6453 0.7133
Download Full SwissProt Results