PROTEIN: HRGMv2_0252_5_78
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0252_5_78.pdb
Genome ID:
Protein ID:
HRGMv2_0252_5_78
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNKKILSLFF IGIFICMNSC GCSKDNNSES GNERTTEGVE VKPLYSTSRV LKNPLSGWVM 60 YCSASADTSY LDKEEYVAVE GRNVKVMDYS SALYIRTKWS VLNPADGKYA WNDPDSELYK 120 LLKAAQRRHI PVAFRVVVDG RDQGANTPQF VFDAGAKYAV ENDKYPDRKT PMPQDPVFQK 180 YYEKFIEAFA AEFNDPEKTA FIDGYGLGKW GEGHSVAYNV NDVNAVDENT ETLKHDVLDW 240 ITKLYAKNFT KVPLVINYHR FLGHPLGQGT FNPNSEGLVS LAIQNGYCLR SDAFGMNNSS 300 WGYTDWEKNI ASQWRYKVPI IMEGGYIVNQ HSYWNDGAGY RKGHPEDVRK GEYDASKEAH 360 VNMMDFRVGG ETDSWFEDAF DLVKSFISEG GYRLYPDKVI VPGSLKSGVS AKIESRWRNM 420 GWGYFPNNLK QWNYKYKVAF ALLDSNDEAR QIFVDDECEP STWIESKPFL YVFDTPEVSV 480 PSGSYTWAVA IVDTTDGNNP AIELAVNAET TTEGWVKLAK VNILQ 525
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05592-F1-model_v4 | 33 | 525 | 32 | 561 | 0.67 |
0.7534 |
| AF-K7L4L5-F1-model_v4 | 8 | 512 | 26 | 532 | 0.5154 |
0.5596 |
| AF-Q8VYW2-F1-model_v4 | 7 | 466 | 33 | 509 | 0.5152 |
0.5995 |
| AF-I1K673-F1-model_v4 | 9 | 512 | 28 | 535 | 0.5102 |
0.5567 |
| AF-C0PJY8-F1-model_v4 | 26 | 390 | 57 | 503 | 0.5082 |
0.7254 |
| AF-A0A0P0XA34-F1-model_v4 | 43 | 390 | 56 | 506 | 0.5078 |
0.7553 |
| AF-K0EUZ8-F1-model_v4 | 19 | 390 | 20 | 416 | 0.5044 |
0.6527 |
| AF-Q10LG9-F1-model_v4 | 44 | 390 | 40 | 487 | 0.5041 |
0.7496 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UEG51675.1 | CBM92 | 24 | 525 | 37 | 533 | 0.8244 |
0.9749 |
| AF-A0A165T486-F1-model_v4 | GH0 | 36 | 524 | 22 | 465 | 0.7414 |
0.8356 |
| AF-A0A859RHN9-F1-model_v4 | GH0 | 32 | 525 | 24 | 472 | 0.7325 |
0.8236 |
| AF-A0A6P1UZ86-F1-model_v4 | GH0 | 35 | 525 | 27 | 472 | 0.7302 |
0.8265 |
| A0A1D8JPH9 | GH0 | 35 | 525 | 27 | 472 | 0.7289 |
0.8251 |
| AF-A0A4Y1VA35-F1-model_v4 | GH105 | 29 | 524 | 73 | 850 | 0.7116 |
0.9332 |
| A0A173ZNQ5 | GH105 | 28 | 524 | 73 | 850 | 0.7103 |
0.9293 |
| AF-A0A7D6XQG7-F1-model_v4 | GH105 | 29 | 524 | 74 | 850 | 0.708 |
0.9285 |
| AF-A0A4P6RFD0-F1-model_v4 | GH105 | 29 | 524 | 74 | 850 | 0.7066 |
0.9267 |
| AF-U5VZX8-F1-model_v4 | CBM35 | 5 | 525 | 20 | 520 | 0.6344 |
0.7405 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UEG51675.1 | CBM92 | 24 | 525 | 37 | 533 | 0.8244 |
0.9749 |
| A0A173ZNQ5 | GH105 | 28 | 524 | 73 | 850 | 0.7103 |
0.9293 |
| USX25342.1 | CBM35 | 13 | 525 | 5 | 466 | 0.6228 |
0.7724 |
| A0A0G3BQ76 | CBM13 | 28 | 525 | 269 | 721 | 0.5839 |
0.7815 |
| UYZ64945.1 | CBM13 | 35 | 525 | 18 | 454 | 0.5746 |
0.787 |
| UYZ63624.1 | CBM13 | 35 | 525 | 24 | 513 | 0.5721 |
0.7374 |
| A0A810P131 | CBM35 | 3 | 525 | 22 | 523 | 0.5675 |
0.7408 |
| BCP97900.1 | GH5_1 | 15 | 524 | 24 | 882 | 0.554 |
0.7172 |
| A0A5B8M8R3 | CBM6 | 36 | 525 | 51 | 535 | 0.5494 |
0.8179 |
| A0A3G3K0E0 | CBM35 | 36 | 525 | 39 | 471 | 0.5421 |
0.8161 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3voc-assembly1.cif.gz_A | 53 | 503 | 3 | 416 | 0.5595 |
0.6376 |
| 2oym-assembly2.cif.gz_B | 51 | 519 | 8 | 420 | 0.5483 |
0.6415 |
| 1ven-assembly1.cif.gz_A | 53 | 516 | 9 | 509 | 0.5196 |
0.591 |
| 1itc-assembly1.cif.gz_A | 53 | 508 | 9 | 509 | 0.5166 |
0.5966 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P96513-F1-model_v4 | 24 | 484 | 28 | 468 | 0.5521 |
0.6287 |
| AF-Q8VYW2-F1-model_v4 | 7 | 466 | 33 | 509 | 0.5152 |
0.5995 |
| AF-O23553-F1-model_v4 | 10 | 421 | 43 | 516 | 0.5029 |
0.6541 |