PROTEIN: HRGMv2_0252_23_4
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Protein File & Metadata
Source:
HRGMv2_0252_23_4.pdb
Genome ID:
Protein ID:
HRGMv2_0252_23_4
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Protein Sequence
MKLLVITDFI GTDASGIVIA KFLSELQKNN DLDVVTFKSD VSGFPGLRNV YVINLPAWLE 60 KIRVERRKML IRRLGYNPFY EYGKFKIIRK LDKDYDAVLA FCHGTGLFGL VGGVSVKKRR 120 NIPLVTFFFD AVPAPIGWIK DDRYRRNLSK MVSRNLKYVD GLLSANRKML QYESGFVPKN 180 HQVKVSGCVY TPGLSSELLN LTHIDNGKTI FCYTGSIYFC RKADHVLEAF RKLVGVYPNC 240 ELWFVGTRRI EDTVEALDSE VKSRIKILPY TYDLMPCFSA SSALIDIDAD LPDDVYLSSK 300 IANYICINRP IISETGMNSE SRRIFSNLKT VYQCGHDAGE LFAAMKNVVE MKGEYDYSER 360 TGLIKMFSLE ENTSKLMGFI SSVISC 386
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F4IBV4-F1-model_v4 | 1 | 386 | 9 | 399 | 0.8145 |
0.8488 |
| AF-Q8CWU0-F1-model_v4 | 1 | 385 | 3 | 385 | 0.8057 |
0.8296 |
| AF-Q58469-F1-model_v4 | 1 | 385 | 4 | 392 | 0.8046 |
0.831 |
| AF-Q0P9C7-F1-model_v4 | 1 | 384 | 2 | 365 | 0.804 |
0.85 |
| AF-Q9HZ80-F1-model_v4 | 1 | 386 | 1 | 413 | 0.8029 |
0.8482 |
| AF-Q5FAE0-F1-model_v4 | 1 | 386 | 1 | 388 | 0.8019 |
0.8258 |
| AF-Q5FAD9-F1-model_v4 | 1 | 383 | 1 | 354 | 0.8018 |
0.8557 |
| AF-K0ETY5-F1-model_v4 | 1 | 386 | 2 | 380 | 0.8013 |
0.8342 |
| AF-X8F781-F1-model_v4 | 1 | 386 | 2 | 384 | 0.8012 |
0.8247 |
| AF-Q2G255-F1-model_v4 | 1 | 386 | 1 | 373 | 0.799 |
0.8389 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-E4TGB9-F1-model_v4 | GT4 | 1 | 386 | 4 | 403 | 0.8382 |
0.8729 |
| AF-A0A7L5AL61-F1-model_v4 | GT4 | 1 | 386 | 1 | 381 | 0.8381 |
0.8673 |
| AF-E4PS16-F1-model_v4 | GT4 | 1 | 386 | 1 | 403 | 0.8372 |
0.8804 |
| AF-A0A291ILU3-F1-model_v4 | GT4 | 1 | 386 | 1 | 412 | 0.8319 |
0.8793 |
| A0A172UBA6 | GT4 | 1 | 386 | 1 | 412 | 0.8319 |
0.8793 |
| AF-A0A2Z5SEP8-F1-model_v4 | GT0 | 1 | 385 | 1 | 416 | 0.8289 |
0.8761 |
| A0A559JTC5 | GT4 | 1 | 385 | 1 | 395 | 0.8286 |
0.8573 |
| AF-A0A0E3SAA7-F1-model_v4 | GT4 | 1 | 386 | 2 | 367 | 0.8281 |
0.8666 |
| AF-A0A0E3LGC8-F1-model_v4 | GT4 | 1 | 384 | 1 | 367 | 0.8277 |
0.8653 |
| AF-A0A2L2MV73-F1-model_v4 | GT4 | 1 | 386 | 4 | 366 | 0.8268 |
0.8791 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A223D1F8 | GT4 | 1 | 386 | 3 | 408 | 0.8408 |
0.8829 |
| E4TGB9 | GT4 | 1 | 386 | 4 | 403 | 0.8382 |
0.8729 |
| E4PS16 | GT4 | 1 | 386 | 1 | 403 | 0.8372 |
0.8804 |
| WFA09127.1 | GT4 | 1 | 386 | 2 | 418 | 0.8349 |
0.8868 |
| A0A6P1R8A9 | GT4 | 1 | 385 | 1 | 404 | 0.8346 |
0.8737 |
| A0A7S9RGP3 | GT4 | 1 | 382 | 2 | 392 | 0.8325 |
0.8648 |
| A0A172UBA6 | GT4 | 1 | 386 | 1 | 412 | 0.8319 |
0.8793 |
| C6LL02 | GT4 | 1 | 386 | 1 | 396 | 0.8306 |
0.8603 |
| UQX89916.1 | GT4 | 1 | 386 | 1 | 390 | 0.8293 |
0.8545 |
| BBM65854.1 | GT4 | 1 | 385 | 1 | 386 | 0.8292 |
0.8505 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly1.cif.gz_B | 1 | 386 | 1 | 368 | 0.8053 |
0.8449 |
| 3oka-assembly1.cif.gz_A | 1 | 386 | 2 | 378 | 0.8031 |
0.8315 |
| 3mbo-assembly4.cif.gz_G | 1 | 386 | 1 | 364 | 0.802 |
0.8453 |
| 3mbo-assembly3.cif.gz_F | 1 | 386 | 1 | 368 | 0.8019 |
0.8415 |
| 2jjm-assembly1.cif.gz_B | 1 | 384 | 1 | 359 | 0.7947 |
0.8435 |
| 6n1x-assembly1.cif.gz_A | 1 | 386 | 4 | 377 | 0.7893 |
0.8267 |
| 5d00-assembly1.cif.gz_B | 1 | 384 | 2 | 361 | 0.7886 |
0.8367 |
| 3mbo-assembly4.cif.gz_H | 1 | 386 | 1 | 368 | 0.7871 |
0.8297 |
| 5d00-assembly1.cif.gz_A | 1 | 385 | 2 | 361 | 0.7863 |
0.8344 |
| 5d01-assembly1.cif.gz_B | 1 | 384 | 2 | 360 | 0.786 |
0.8361 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58469-F1-model_v4 | 1 | 385 | 4 | 392 | 0.8046 |
0.831 |
| AF-Q0P9C7-F1-model_v4 | 1 | 384 | 2 | 365 | 0.804 |
0.85 |
| AF-P9WMZ2-F1-model_v4 | 1 | 386 | 2 | 384 | 0.8027 |
0.8259 |
| AF-Q93P60-F1-model_v4 | 1 | 386 | 1 | 390 | 0.7991 |
0.8281 |
| AF-Q58577-F1-model_v4 | 1 | 385 | 3 | 351 | 0.7968 |
0.8589 |
| AF-P9WMZ3-F1-model_v4 | 1 | 386 | 2 | 384 | 0.796 |
0.8198 |
| AF-P71053-F1-model_v4 | 1 | 386 | 2 | 374 | 0.7955 |
0.8382 |
| AF-O05083-F1-model_v4 | 1 | 380 | 2 | 353 | 0.7943 |
0.8515 |
| AF-Q0P9C9-F1-model_v4 | 1 | 386 | 1 | 375 | 0.7941 |
0.8267 |
| AF-A0R043-F1-model_v4 | 3 | 385 | 1 | 378 | 0.7938 |
0.8244 |