dbCAN Logo

PROTEIN: HRGMv2_0207_4_70

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0207_4_70.pdb
Genome ID:
HRGMv2_0207
Protein ID:
HRGMv2_0207_4_70

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MSQLSKSKRV   TIANSFAILA   AALLMWVFTT   RRAQRQTDQL   TSTVVKVAVD   LSPDGLRVDS 60
LGEITGRAKK   LLELVLPQRE   YEIVPFATRC   EAVEKLKKGE   VQLYATTMPL   SMANKIEGTS 120
PTEWLYTSSF   NLLHKASNTN   WEADFTGEEP   VTVWVSEEDQ   AAITIVENLA   ELNYPSLSVE 180
SSDLPTMQLA   TKLSKGEIDY   LICDKNLADA   IVAVDSTLQS   SKGIGFELQQ   VWLVNATIDS 240
LKIAIDSAII   AKRGSQEWLD   IINELKKK 268
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H3GTW4-F1-model_v4 38 268 2 228 0.7089 0.7952
AF-Q0PA73-F1-model_v4 41 268 16 243 0.6854 0.8069
AF-Q9HYX9-F1-model_v4 41 268 17 244 0.6849 0.7951
AF-Q9HUA7-F1-model_v4 38 268 28 259 0.6813 0.8045
AF-Q32DX6-F1-model_v4 41 268 18 243 0.6749 0.7848
AF-A0A0H3GQV6-F1-model_v4 41 268 18 243 0.6731 0.7827
AF-Q8ZPA3-F1-model_v4 40 267 25 253 0.6726 0.7898
AF-Q9HU47-F1-model_v4 40 266 24 251 0.6677 0.7831
AF-Q46125-F1-model_v4 41 267 34 255 0.6672 0.8043
AF-O25594-F1-model_v4 33 267 14 250 0.6672 0.769
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B9VB93-F1-model_v4 GH23 38 268 6 240 0.6019 0.7554
AF-A0A3S4XSZ3-F1-model_v4 GH23 38 268 37 268 0.5923 0.7662
AF-A0A455UFB4-F1-model_v4 GH23 38 268 41 270 0.5911 0.8569
AF-A0A6M4GWY2-F1-model_v4 GH23 16 268 12 256 0.5903 0.826
AF-A0A3S8U2X2-F1-model_v4 CBM50 40 268 116 363 0.5853 0.7954
AF-A0A6M4H9W0-F1-model_v4 GH23 18 268 10 433 0.5847 0.7983
AF-U3TUE4-F1-model_v4 GH23 46 268 1 224 0.5806 0.7835
AF-A0A0H4PC31-F1-model_v4 GH23 38 268 43 275 0.5777 0.8507
AF-A0A1D9BCY7-F1-model_v4 GH23 29 268 4 417 0.5685 0.8097
AF-A0A1P8FKP9-F1-model_v4 GH23 29 268 19 435 0.567 0.8091
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A975BJI5 CBM50 33 268 36 310 0.6554 0.8133
A3JZS9 CBM50 14 268 36 369 0.6474 0.8037
QQZ29022.1 CBM50 14 268 1 271 0.6324 0.7553
UWR00790.1 CBM50 23 268 102 356 0.6322 0.8004
QYX58489.1 CBM50 37 268 43 337 0.6319 0.8237
V4J4F9 CBM50 42 268 102 345 0.6234 0.8334
UPH71559.1 CBM50 40 268 124 369 0.6139 0.8363
UWQ99938.1 CBM50 41 268 111 357 0.6132 0.8286
A0A291FVQ4 CBM50 42 268 95 338 0.6091 0.8098
A0A1V0RU95 CBM50 27 268 108 359 0.6091 0.782
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1ii5-assembly1.cif.gz_A 42 267 2 221 0.739 0.8367
2o1m-assembly1.cif.gz_A 41 267 1 229 0.7249 0.8171
3mpl-assembly1.cif.gz_A 40 266 13 233 0.7247 0.8363
2o1m-assembly2.cif.gz_B 41 267 1 223 0.7205 0.8128
3k4u-assembly1.cif.gz_A 42 268 1 228 0.7182 0.8133
3mpk-assembly1.cif.gz_A 40 266 13 235 0.7171 0.8249
4bdo-assembly1.cif.gz_A 43 267 1 242 0.7121 0.8256
6mld-assembly1.cif.gz_A 40 267 1 232 0.7114 0.8096
3kbr-assembly1.cif.gz_A 38 266 6 231 0.7102 0.8063
4wxj-assembly1.cif.gz_A 43 268 1 251 0.7093 0.8335
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O34406-F1-model_v4 41 267 31 260 0.6929 0.8328
AF-P54952-F1-model_v4 33 267 24 255 0.6746 0.7947
AF-Q46125-F1-model_v4 41 267 34 255 0.6672 0.8043
AF-P30859-F1-model_v4 41 268 18 243 0.6669 0.7764
AF-P30860-F1-model_v4 41 268 18 243 0.6655 0.7739
AF-P45091-F1-model_v4 41 268 17 239 0.6649 0.777
AF-O34852-F1-model_v4 41 268 33 263 0.6633 0.8
AF-P49618-F1-model_v4 42 268 16 237 0.6629 0.7746
AF-P42400-F1-model_v4 38 268 40 272 0.658 0.8032
AF-P52626-F1-model_v4 41 267 20 243 0.6578 0.7781
Download Full SwissProt Results