PROTEIN: HRGMv2_0186_61_4
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Protein File & Metadata
Source:
HRGMv2_0186_61_4.pdb
Genome ID:
Protein ID:
HRGMv2_0186_61_4
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Protein Sequence
MIQSAISVNC GAKYRNYPFY NWVPKPLGIV LLILLFIPIL TVGGVYTANS GDMTSGLGIQ 60 SEHIQFVGFV TSIGMAAFSP FFYQLVCIRR EKMMCVVGFS VMYLLSYVCA VTDSIFVLAL 120 CSLVMGFLRM VLMMANLFTL IRYAFGMEAT QNITPGNEPA DGEGWDRLDS EKSKSMPIIY 180 LFFMILGQLG TSLTAWLAYE YQWQDVYYYM MGMTLVAILI VLVTMPYHAY NNRRFPITFR 240 KFGNVAVFSS MMTCGIYVLV YGKTLDWFAD PTIVRSTILT VVFAAVFFYM EWSHRSPYFL 300 MEVFRLRTIN MGIVLFLLLM VFNTSSMFVN VFTGVGMEID NWQNAALGNW SMLGYFIGAV 360 IAIILGSRNV KLKYLFGLGF MIIGVSALFM YFEVQTAGLY ERMKYPVVIR STGMMLIYSL 420 AAVYANQRMP YKYLSTWICI MLSVRMVIGP GIGSALYSNV LQHRQQHYVT MFVQDVDRTD 480 TQSAAAYDQT AQGMRWQGRS ETEAENMAAM SAKGKVQVQA TLSAVKEMSG WTFYGCMLSM 540 LFVLIYPYKK RKLSAWRDLR SAKSDNFINL AAIKH 575
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AEJ0-F1-model_v4 | 6 | 557 | 1 | 508 | 0.8066 |
0.8738 |
| AF-A0A0H3GNL5-F1-model_v4 | 1 | 553 | 2 | 520 | 0.8029 |
0.8611 |
| AF-P52600-F1-model_v4 | 4 | 553 | 2 | 508 | 0.8013 |
0.8709 |
| AF-P44927-F1-model_v4 | 2 | 553 | 1 | 508 | 0.7995 |
0.8665 |
| AF-Q32DH7-F1-model_v4 | 3 | 552 | 1 | 507 | 0.7884 |
0.8579 |
| AF-Q5F680-F1-model_v4 | 7 | 553 | 1 | 502 | 0.7879 |
0.8592 |
| AF-A0A0H3GSP9-F1-model_v4 | 5 | 552 | 11 | 538 | 0.7751 |
0.8385 |
| AF-Q8ZMK8-F1-model_v4 | 5 | 557 | 1 | 508 | 0.7659 |
0.8324 |
| AF-Q9I008-F1-model_v4 | 1 | 553 | 11 | 523 | 0.7657 |
0.8384 |
| AF-Q9I4A2-F1-model_v4 | 15 | 550 | 8 | 503 | 0.7647 |
0.8418 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 9 | 558 | 7 | 541 | 0.7253 |
0.7823 |
| ARF89445.1 | GT1 | 3 | 552 | 65 | 952 | 0.6219 |
0.8142 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 9 | 571 | 16 | 484 | 0.6175 |
0.7088 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 14 | 572 | 31 | 563 | 0.5817 |
0.7859 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 575 | 295 | 782 | 0.5325 |
0.719 |
| A0A9Q9RZ67 | GH78 | 3 | 564 | 732 | 1462 | 0.5013 |
0.739 |
| AF-A0A7H8QT70-F1-model_v4 | GH27 | 2 | 575 | 37 | 790 | 0.5007 |
0.6468 |
| F9G000 | GH3 | 1 | 561 | 39 | 563 | 0.4861 |
0.756 |
| AF-A0A7H8R1M0-F1-model_v4 | GH28 | 5 | 563 | 469 | 1001 | 0.4802 |
0.6566 |
| A0A8S2B775 | GT5 | 4 | 571 | 211 | 926 | 0.4766 |
0.5999 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 9 | 558 | 7 | 541 | 0.7253 |
0.7823 |
| ARF89445.1 | GT1 | 3 | 552 | 65 | 952 | 0.6219 |
0.8142 |
| A0A387HHJ8 | GT1 | 14 | 572 | 31 | 563 | 0.5817 |
0.7859 |
| A0A7H8RF34 | CBM24 | 1 | 575 | 295 | 782 | 0.5325 |
0.719 |
| A0A9Q9RZ67 | GH78 | 3 | 564 | 732 | 1462 | 0.5013 |
0.739 |
| A0A7H8QT70 | GH27 | 2 | 575 | 37 | 790 | 0.5007 |
0.6468 |
| F9G000 | GH3 | 1 | 561 | 39 | 563 | 0.4861 |
0.756 |
| A0A7H8R1M0 | GH28 | 5 | 563 | 469 | 1001 | 0.4802 |
0.6566 |
| A0A8S2B775 | GT5 | 4 | 571 | 211 | 926 | 0.4766 |
0.5999 |
| A0A1S9DVV1 | GH95 | 1 | 551 | 609 | 2004 | 0.4625 |
0.7487 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 11 | 550 | 1 | 483 | 0.7239 |
0.8031 |
| 7y58-assembly1.cif.gz_A | 6 | 557 | 4 | 510 | 0.7143 |
0.7783 |
| 8pnl-assembly2.cif.gz_C | 11 | 550 | 1 | 486 | 0.7125 |
0.7887 |
| 7d5p-assembly1.cif.gz_A | 25 | 549 | 1 | 408 | 0.6861 |
0.815 |
| 7d5p-assembly2.cif.gz_B | 25 | 550 | 1 | 413 | 0.6834 |
0.8078 |
| 7d5q-assembly2.cif.gz_B | 17 | 550 | 1 | 411 | 0.6808 |
0.8061 |
| 7d5q-assembly1.cif.gz_A | 17 | 549 | 1 | 403 | 0.6807 |
0.8124 |
| 6gs4-assembly1.cif.gz_A | 24 | 554 | 2 | 468 | 0.6687 |
0.7544 |
| 6ghj-assembly1.cif.gz_A | 15 | 552 | 1 | 457 | 0.6585 |
0.7495 |
| 7zc2-assembly1.cif.gz_A | 14 | 548 | 4 | 470 | 0.6546 |
0.7409 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AEJ1-F1-model_v4 | 6 | 557 | 1 | 508 | 0.8091 |
0.877 |
| AF-P0AEJ0-F1-model_v4 | 6 | 557 | 1 | 508 | 0.8066 |
0.8738 |
| AF-P52600-F1-model_v4 | 4 | 553 | 2 | 508 | 0.8013 |
0.8709 |
| AF-P44927-F1-model_v4 | 2 | 553 | 1 | 508 | 0.7995 |
0.8665 |
| AF-Q9RQ29-F1-model_v4 | 6 | 553 | 1 | 502 | 0.7899 |
0.8621 |
| AF-P0DPR7-F1-model_v4 | 9 | 552 | 6 | 512 | 0.7806 |
0.8488 |
| AF-P37594-F1-model_v4 | 15 | 553 | 1 | 495 | 0.7625 |
0.8344 |
| AF-D0ZXQ3-F1-model_v4 | 15 | 553 | 1 | 495 | 0.7591 |
0.8309 |
| AF-P94574-F1-model_v4 | 15 | 553 | 1 | 452 | 0.7531 |
0.8569 |
| AF-P9WJW8-F1-model_v4 | 15 | 553 | 1 | 508 | 0.7525 |
0.8148 |